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Protein Overview: LSM7

General Information:
Name(s) found: LSM7 [HGNC (HUGO)]
Description(s) found:
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  • gi|7706423|ref|NP_057283.1| U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens] [NCBI NR]
  • gi|5919155|gb|AAD56231.1|AF182293_1 U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens] [NCBI NR]
  • gi|17391362|gb|AAH18621.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo sapiens] [NCBI NR]
  • gi|12018382|gb|AAG45442.1|AC005258_2 U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens] [NCBI NR]
  • gi|10720075|sp|Q9UK45.1|LSM7_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm7 [NCBI NR]
  • LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) [HGNC (HUGO)]
  • U6 snRNA-associated Sm-like protein LSm7 OS=Homo sapiens GN=LSM7 PE=1 SV=1 [Swiss-Prot]
  • U6 snRNA-associated Sm-like protein LSm7 [hmr_yeast5_DM3-1_pombe.fasta]
  • U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]gi|17391362|gb|AAH18621.1| U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]gi|5919155|gb|AAD56231.1| U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]gi|12018382|gb|AAG45442.1| U6 snRN [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 U6 snRNA-associated Sm-like protein LSm7 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_016199) U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM7 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • unnamed protein product [Homo sapiens] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=LSM7 U6 snRNA-associated Sm-like protein LSm7 [human-ipi-250309-contam.fasta]
  • IPI:IPI00007163.1|SWISS-PROT:Q9UK45|ENSEMBL:ENSP00000252622|REFSEQ:NP_057283|H-INV:HIT000072860|VEGA:OTTHUMP00000077489 Tax_Id=9606 Gene_Symbol=LSM7 U6 snRNA-associated Sm-like protein LSm7 [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Q9UK45; RecName: Full=U6 snRNA-associated Sm-like protein LSm7; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • U6 snRNA-associated Sm-like protein LSm7 OS=Homo sapiens GN=LSM7 [011711_HMR.fasta]
  • U6 snRNA-associated Sm-like protein LSm7 n=12 Tax=Euteleostomi RepID=LSM7_HUMAN [UniProt_Xenopus_laevis_01-01-2011_reversed.fasta]
  • GeneSymbol=LSM7 Synonyms=YNL147W U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00007163.1|SWISS-PROT:Q9UK45|ENSEMBL:ENSP00000252622|REFSEQ:NP_057283|H-INV:HIT000072860 Tax_Id=9606 Gene_Symbol=LSM7 U6 snRNA-associated Sm-like protein LSm7 [ipi.HUMAN.20110912.fasta]
  • U6 snRNA-associated Sm-like protein LSm7 GN=LSM7 [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 103 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKEKKKKE SILDLSKYID KTIRVKFQGG REASGILKGF DPLLNLVLDG TIEYMRDPDD  60
   61 QYKLTEDTRQ LGLVVCRGTS VVLICPQDGM EAIPNPFIQQ QDA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] PSI-BLAST 21.0 B core SNRNP protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle