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Protein Overview: PHF5A

General Information:
Name(s) found: PHF5A [HGNC (HUGO)]
Description(s) found:
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  • gi|6572198|emb|CAB62939.1| PHD finger protein 5A [Homo sapiens] [NCBI NR]
  • gi|50370005|gb|AAH75808.1| PHD finger protein 5A [Homo sapiens] [NCBI NR]
  • gi|47678327|emb|CAG30284.1| bK223H9.2 [Homo sapiens] [NCBI NR]
  • gi|46577625|sp|Q7RTV0.1|PHF5A_HUMAN RecName: Full=PHD finger-like domain-containing protein 5A; Short=PHD finger-like domain protein 5A; AltName: Full=Splicing factor 3B-associated 14 kDa protein; AltName: Full=SF3b14b [NCBI NR]
  • gi|23336898|tpg|DAA00074.1| TPA_exp: SF3b14b [Homo sapiens] [NCBI NR]
  • gi|14249398|ref|NP_116147.1| PHD-finger 5A [Homo sapiens] [NCBI NR]
  • gi|13938376|gb|AAH07321.1| PHD finger protein 5A [Homo sapiens] [NCBI NR]
  • gi|119580838|gb|EAW60434.1| PHD finger protein 5A, isoform CRA_a [Homo sapiens] [NCBI NR]
  • gi|119580837|gb|EAW60433.1| PHD finger protein 5A, isoform CRA_a [Homo sapiens] [NCBI NR]
  • PHD finger protein 5A [HGNC (HUGO)]
  • PHD finger-like domain-containing protein 5A OS=Homo sapiens GN=PHF5A PE=1 SV=1 [Swiss-Prot]
  • (Q7RTV0) PHD finger-like domain protein 5A (Splicing factor 3B associated 14 kDa protein) (SF3b14b) [Swiss-Prot]
  • Hypothetical protein BK223H9.2/MGC1346 [hmr_yeast5_DM3-1_pombe.fasta]
  • SF3b14b; PHD-finger 5a [HMR_022704.fasta]
  • transcription factor INI [Rattus norvegicus]gi|27545283|ref|NP_775373.1| PHD finger protein 5A [Danio rerio]gi|20162519|gb|AAM14623.1| transcription factor INI [Rattus norvegicus]gi|24415990|ref|NP_081013.1| PHF5A [Mus musculus]gi|14249398|ref|NP_1161 [nrdb_11152004_Chlamydomonas]
  • PHD finger-like domain protein 5A (Splicing factor 3B associated 14 kDa protein) (SF3b14b) [Yateslab_human_na_07-28-2006_reversed.fasta]
  • Tax_Id=9606 PHD finger-like domain-containing protein 5A [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_032758) hypothetical protein MGC1346; likely ortholog of mouse PHD-finger 5a [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • PHD-finger 5A [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • Tax_Id=9606 PHD finger-like domain protein 5A [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • SF3b14b; PHD-finger 5a [Homo sapiens] [HumanGallus06162005.fasta]
  • bK223H9.2 [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • PHD finger-like domain-containing protein 5A (PHD finger-like domain protein 5A) (Splicing factor 3B-associated 14 kDa protein) (SF3b14b) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • PHD finger protein 5A [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • PHD finger protein 5A, isoform CRA_a [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • TPA_exp: SF3b14b [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 PHD FINGER-LIKE DOMAIN PROTEIN 5A [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=PHF5A PHD finger-like domain-containing protein 5A [human-ipi-250309-contam.fasta]
  • OTTHUMP00000028653 [Homo sapiens] [nr-271106-contam.fasta]
  • IPI:IPI00005511.1|SWISS-PROT:Q7RTV0|ENSEMBL:ENSP00000216252|REFSEQ:NP_116147|H-INV:HIT000033145|VEGA:OTTHUMP00000028653;OTTHUMP00000198827 Tax_Id=9606 Gene_Symbol=PHF5A PHD finger-like domain-containing protein 5A [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=PHF5A PHD finger-like domain-containing protein 5A ENSG00000100410 IPI00005511 [drosphohumanreversed.fasta]
  • PHD finger-like domain-containing protein 5A [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • Q7RTV0;Q9UH06; RecName: Full=PHD finger-like domain-containing protein 5A; AltName: Full=Splicing factor 3B-associated 14 kDa protein; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • PHD finger-like domain-containing protein 5A OS=Homo sapiens GN=PHF5A [011711_HMR.fasta]
  • PHD finger-like domain-containing protein 5A n=33 Tax=Eukaryota RepID=PHF5A_HUMAN [UniProt_Xenopus_laevis_01-01-2011_reversed.fasta]
  • GeneSymbol=PHF5A Synonyms=INI|MGC1346|Rds3|SAP14b|SF3b14b|bK223H9.2 PHD finger-like domain-containing protein 5A [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00005511.1|SWISS-PROT:Q7RTV0|ENSEMBL:ENSP00000216252|REFSEQ:NP_116147|H-INV:HIT000033145|VEGA:OTTHUMP00000198827 Tax_Id=9606 Gene_Symbol=PHF5A PHD finger-like domain-containing protein 5A [ipi.HUMAN.20110912.fasta]
  • PHD finger-like domain-containing protein 5A GN=PHF5A [Doctor+uniprot-HUMAN-120911.fasta]
  • PHD finger protein 5A, isoform CRA_a OS=Homo sapiens GN=PHF5A PE=4 SV=1 [uniprot-human-031015-contam.fasta]
    • Organism: Homo sapiens
    Length: 110 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKHHPDLIF CRKQAGVAIG RLCEKCDGKC VICDSYVRPC TLVRICDECN YGSYQGRCVI  60
   61 CGGPGVSDAY YCKECTIQEK DRDGCPKIVN LGSSKTDLFY ERKKYGFKKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] Pfam 88.657577 No description for PF03660.5 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle