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Protein Overview: SETD4

General Information:
Name(s) found: SETD4 [HGNC (HUGO)]
Description(s) found:
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  • gi|8393013|ref|NP_059134.1| SET domain containing 4 isoform a [Homo sapiens] [NCBI NR]
  • gi|7023055|dbj|BAA91819.1| unnamed protein product [Homo sapiens] [NCBI NR]
  • gi|12229715|sp|Q9NVD3.1|SETD4_HUMAN RecName: Full=SET domain-containing protein 4 [NCBI NR]
  • gi|119630165|gb|EAX09760.1| SET domain containing 4, isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|119630163|gb|EAX09758.1| SET domain containing 4, isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|119630162|gb|EAX09757.1| SET domain containing 4, isoform CRA_b [Homo sapiens] [NCBI NR]
  • SET domain containing 4 [HGNC (HUGO)]
  • SET domain-containing protein 4 OS=Homo sapiens GN=SETD4 PE=2 SV=1 [Swiss-Prot]
  • (Q9NVD3) Protein C21orf18 [Swiss-Prot]
  • Splice isoform A of Q9NVD3 [hmr_yeast5_DM3-1_pombe.fasta]
  • chromosome 21 open reading frame 18 [HMR_022704.fasta]
  • chromosome 21 open reading frame 18 [Homo sapiens]gi|7023055|dbj|BAA91819.1| unnamed protein product [Homo sapiens]gi|12229715|sp|Q9NVD3|CU18_HUMAN Protein C21orf18 [nrdb_11152004_Chlamydomonas]
  • Protein C21orf18 [Yateslab_human_na_07-28-2006_reversed.fasta]
  • Tax_Id=9606 Splice Isoform A of SET domain-containing protein 4 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_017438) chromosome 21 open reading frame 18 [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • SET domain containing 4 isoform a [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • Tax_Id=9606 Splice Isoform A of Protein C21orf18 [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • chromosome 21 open reading frame 18 [Homo sapiens] [HumanGallus06162005.fasta]
  • SET domain-containing protein 4 [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • unnamed protein product [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • SET domain containing 4, isoform CRA_b [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 Isoform A of SET domain-containing protein 4 [EBI-IPI_human_3.23_11-02-2006_con_reversed.fasta]
  • Tax_Id=9606 SPLICE ISOFORM 1 OF PROTEIN C21ORF18 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=SETD4 Isoform A of SET domain-containing protein 4 [human-ipi-250309-contam.fasta]
  • IPI:IPI00019322.1|SWISS-PROT:Q9NVD3-1|ENSEMBL:ENSP00000329189;ENSP00000382163|REFSEQ:NP_059134|VEGA:OTTHUMP00000108887;OTTHUMP00000108890 Tax_Id=9606 Gene_Symbol=SETD4 Isoform A of SET domain-containing protein 4 [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=SETD4 Isoform A of SET domain-containing protein 4 ENSG00000185917 IPI00019322 IPI00218580 IPI00748436 IPI00477746 IPI00792793 IPI00795402 IPI00796039 IPI00796595 IPI00791050 IPI00789089 [drosphohumanreversed.fasta]
  • SET domain-containing protein 4 isoform a [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • Q9NVD3;B4DT14;Q8NE19;Q9BU46; RecName: Full=SET domain-containing protein 4; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Isoform A of SET domain-containing protein 4 OS=Homo sapiens GN=SETD4 [011711_HMR.fasta]
  • IPI:IPI00019322.1|SWISS-PROT:Q9NVD3-1|TREMBL:D3DSG2|ENSEMBL:ENSP00000329189;ENSP00000382163|REFSEQ:NP_059134|VEGA:OTTHUMP00000108887;OTTHUMP00000108890 Tax_Id=9606 Gene_Symbol=SETD4 Isoform A of SET domain-containing protein 4 [ipi.HUMAN.fasta.20100406]
  • GeneSymbol=SETD4 Synonyms=C21orf18|C21orf27 SET domain-containing protein 4 isoform a [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • SET domain-containing protein 4 GN=SETD4 [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKGKGRTSR IRRRKLCGSS ESRGVNESHK SEFIELRKWL KARKFQDSNL APACFPGTGR  60
   61 GLMSQTSLQE GQMIISLPES CLLTTDTVIR SYLGAYITKW KPPPSPLLAL CTFLVSEKHA 120
  121 GHRSLWKPYL EILPKAYTCP VCLEPEVVNL LPKSLKAKAE EQRAHVQEFF ASSRDFFSSL 180
  181 QPLFAEAVDS IFSYSALLWA WCTVNTRAVY LRPRQRECLS AEPDTCALAP YLDLLNHSPH 240
  241 VQVKAAFNEE THSYEIRTTS RWRKHEEVFI CYGPHDNQRL FLEYGFVSVH NPHACVYVSR 300
  301 EILVKYLPST DKQMDKKISI LKDHGYIENL TFGWDGPSWR LLTALKLLCL EAEKFTCWKK 360
  361 VLLGEVISDT NEKTSLDIAQ KICYYFIEET NAVLQKVSHM KDEKEALINQ LTLVESLWTE 420
  421 ELKILRASAE TLHSLQTAFT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..440] PSI-BLAST 75.221849 RuBisCo LSMT C-terminal, substrate-binding domain; RuBisCo LSMT catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.0186534007183686 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle