Protein Overview: gi|88192891, gi|...

General Information:
Name(s) found:	gi\|9963797 [NCBI NR] gi\|88192892 [NCBI NR] gi\|88192891 [NCBI NR] gi\|7706326 [NCBI NR] gi\|6841570 [NCBI NR] gi\|62822095 [NCBI NR] gi\|4929689 [NCBI NR] gi\|189053227 [NCBI NR] gi\|15930037 [NCBI NR] gi\|15278118 [NCBI NR] gi\|12585536 [NCBI NR] gi\|119621172 [NCBI NR]
Description(s) found: Found 42 descriptions. SHOW ALL	gi\|9963797\|gb\|AAG09698.1\|AF184213_1 ht006 protein [Homo sapiens] [NCBI NR] gi\|88192892\|pdb\|2F9D\|B Chain B, 2.5 Angstrom Resolution Structure Of The Spliceosomal Protein P14 Bound To Region Of Sf3b155 [NCBI NR] gi\|88192891\|pdb\|2F9D\|A Chain A, 2.5 Angstrom Resolution Structure Of The Spliceosomal Protein P14 Bound To Region Of Sf3b155 [NCBI NR] gi\|7706326\|ref\|NP_057131.1\| splicing factor 3B, 14 kDa subunit [Homo sapiens] [NCBI NR] gi\|6841570\|gb\|AAF29138.1\|AF161523_1 HSPC175 [Homo sapiens] [NCBI NR] gi\|62822095\|gb\|AAY14664.1\| unknown [Homo sapiens] [NCBI NR] gi\|4929689\|gb\|AAD34105.1\|AF151868_1 CGI-110 protein [Homo sapiens] [NCBI NR] gi\|189053227\|dbj\|BAG34849.1\| unnamed protein product [Homo sapiens] [NCBI NR] gi\|15930037\|gb\|AAH15463.1\| Splicing factor 3B, 14 kDa subunit [Homo sapiens] [NCBI NR] gi\|15278118\|gb\|AAK94041.1\|AF401310_1 pre-mRNA branch site protein p14 [Homo sapiens] [NCBI NR] gi\|12585536\|sp\|Q9Y3B4.1\|PM14_HUMAN RecName: Full=Pre-mRNA branch site protein p14; AltName: Full=SF3B 14 kDa subunit [NCBI NR] gi\|119621172\|gb\|EAX00767.1\| splicing factor 3B, 14 kDa subunit [Homo sapiens] [NCBI NR]
Organism:	Homo sapiens
Length:	125 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MAMQAAKRAN IRLPPEVNRI LYIRNLPYKI TAEEMYDIFG KYGPIRQIRV GNTPETRGTA 60 61 YVVYEDIFDA KNACDHLSGF NVCNRYLVVL YYNANRAFQK MDTKKKEEQL KLLKEKYGIN 120 121 TDPPK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	gi\|14317902, gi\|...	No Comments	Cheeseman, I.M., et al. (2004)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..125]	PSI-BLAST	28.154902	2.5 angstrom resolution structure of the spliceosomal protein p14 bound to region of SF3b155

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
RNA binding	4.19321059609759	bayes_pls_golite062009
mRNA binding	3.12182789118099	bayes_pls_golite062009
binding	2.59476451386603	bayes_pls_golite062009
nucleic acid binding	2.4424340402417	bayes_pls_golite062009
	1.49638737900598	bayes_pls_golite062009
protein binding	1.0739686189111	bayes_pls_golite062009
single-stranded RNA binding	1.02921658232313	bayes_pls_golite062009
poly-pyrimidine tract binding	0.813292993207772	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle