Protein Overview: COL7A1

General Information:
Name(s) found:	COL7A1 [HGNC (HUGO)]
Description(s) found: SHOW ONLY BEST	gi\|987125\|gb\|AAA75438.1\| alpha-1 type VII collagen [NCBI NR] gi\|4502961\|ref\|NP_000085.1\| alpha 1 type VII collagen precursor [Homo sapiens] [NCBI NR] gi\|1345650\|sp\|Q02388.2\|CO7A1_HUMAN RecName: Full=Collagen alpha-1(VII) chain; AltName: Full=Long-chain collagen; Short=LC collagen; Flags: Precursor [NCBI NR] collagen, type VII, alpha 1 [HGNC (HUGO)] Collagen alpha-1(VII) chain OS=Homo sapiens GN=COL7A1 PE=1 SV=2 [Swiss-Prot] (Q02388) Collagen alpha 1(VII) chain precursor (Long-chain collagen) (LC collagen) [Swiss-Prot] Collagen alpha 1 [hmr_yeast5_DM3-1_pombe.fasta] alpha 1 type VII collagen precursor; collagen VII, alpha-1 polypeptide; LC collagen; long chain collagen [HMR_022704.fasta] alpha 1 type VII collagen precursor [Homo sapiens]gi\|987125\|gb\|AAA75438.1\| alpha-1 type VII collagengi\|1345650\|sp\|Q02388\|CA17_HUMAN Collagen alpha 1(VII) chain precursor (Long-chain collagen) (LC collagen) [nrdb_11152004_Chlamydomonas] Collagen alpha 1(VII) chain precursor (Long-chain collagen) (LC collagen) [Yateslab_human_na_07-28-2006_reversed.fasta] Tax_Id=9606 Collagen alpha-1(VII) chain precursor [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta] (NM_000094) alpha 1 type VII collagen precursor; collagen VII, alpha-1 polypeptide; LC collagen; long chain collagen [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] alpha 1 type VII collagen precursor [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta] Tax_Id=9606 Collagen alpha 1(VII) chain precursor [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta] Tax_Id=9606 Collagen alpha 1 [EBI-IPI_human_3.04_03-07-2005_reverse.fasta] alpha 1 type VII collagen precursor; collagen VII, alpha-1 polypeptide; LC collagen; long chain collagen [Homo sapiens] [HumanGallus06162005.fasta] Collagen alpha-1(VII) chain precursor (Long-chain collagen) (LC collagen) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta] alpha-1 type VII collagen [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta] Tax_Id=9606 COLLAGEN ALPHA 1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] RecName: Full=Collagen alpha-1(VII) chain; AltName: Full=Long-chain collagen; Short=LC collagen; Flags: Precursor [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta] Tax_Id=9606 Gene_Symbol=COL7A1 Isoform 1 of Collagen alpha-1(VII) chain [human-ipi-250309-contam.fasta] IPI:IPI00025418.2\|SWISS-PROT:Q02388-1\|TREMBL:Q59F16\|ENSEMBL:ENSP00000332371\|REFSEQ:NP_000085\|H-INV:HIT000191499\|VEGA:OTTHUMP00000164822;OTTHUMP00000171114 Tax_Id=9606 Gene_Symbol=COL7A1 Isoform 1 of Collagen alpha-1(VII) chain [ipi.HUMAN.fasta.20090807] [human_BMb_040710_contam.fasta] Tax_Id=9606 Gene_Symbol=COL7A1 Isoform 1 of Collagen alpha-1(VII) chain precursor ENSG00000114270 IPI00025418 IPI00853500 IPI00794493 IPI00795118 IPI00798057 IPI00793896 [drosphohumanreversed.fasta] Tax_Id=9606 Gene_Symbol=COL7A1 Isoform 1 of Collagen alpha-1(VII) chain precursor [EBI-IPI_human_3.30_06-28-2007_con_reversed.fasta] collagen alpha-1(VII) chain precursor [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta] Q02388;Q14054;Q16507; RecName: Full=Collagen alpha-1(VII) chain; AltName: Full=Long-chain collagen; Flags: Precursor; [UniProt_Human_2010_06_06-01-2010_reversed.fasta] Isoform 1 of Collagen alpha-1(VII) chain OS=Homo sapiens GN=COL7A1 [011711_HMR.fasta] GeneSymbol=COL7A1 Synonyms=EBD1\|EBDCT\|EBR1 collagen alpha-1(VII) chain precursor [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta] IPI:IPI00025418.2\|SWISS-PROT:Q02388-1\|TREMBL:Q59F16\|ENSEMBL:ENSP00000332371\|REFSEQ:NP_000085\|H-INV:HIT000191499\|VEGA:OTTHUMP00000164822 Tax_Id=9606 Gene_Symbol=COL7A1 Isoform 1 of Collagen alpha-1(VII) chain [ipi.HUMAN.20110912.fasta] Collagen alpha-1(VII) chain GN=COL7A1 [Doctor+uniprot-HUMAN-120911.fasta]
Organism:	Homo sapiens
Length:	2944 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLRLLVAAL CAGILAEAPR VRAQHRERVT CTRLYAADIV FLLDGSSSIG RSNFREVRSF  60
   61 LEGLVLPFSG AASAQGVRFA TVQYSDDPRT EFGLDALGSG GDVIRAIREL SYKGGNTRTG 120
  121 AAILHVADHV FLPQLARPGV PKVCILITDG KSQDLVDTAA QRLKGQGVKL FAVGIKNADP 180
  181 EELKRVASQP TSDFFFFVND FSILRTLLPL VSRRVCTTAG GVPVTRPPDD STSAPRDLVL 240
  241 SEPSSQSLRV QWTAASGPVT GYKVQYTPLT GLGQPLPSER QEVNVPAGET SVRLRGLRPL 300
  301 TEYQVTVIAL YANSIGEAVS GTARTTALEG PELTIQNTTA HSLLVAWRSV PGATGYRVTW 360
  361 RVLSGGPTQQ QELGPGQGSV LLRDLEPGTD YEVTVSTLFG RSVGPATSLM ARTDASVEQT 420
  421 LRPVILGPTS ILLSWNLVPE ARGYRLEWRR ETGLEPPQKV VLPSDVTRYQ LDGLQPGTEY 480
  481 RLTLYTLLEG HEVATPATVV PTGPELPVSP VTDLQATELP GQRVRVSWSP VPGATQYRII 540
  541 VRSTQGVERT LVLPGSQTAF DLDDVQAGLS YTVRVSARVG PREGSASVLT VRREPETPLA 600
  601 VPGLRVVVSD ATRVRVAWGP VPGASGFRIS WSTGSGPESS QTLPPDSTAT DITGLQPGTT 660
  661 YQVAVSVLRG REEGPAAVIV ARTDPLGPVR TVHVTQASSS SVTITWTRVP GATGYRVSWH 720
  721 SAHGPEKSQL VSGEATVAEL DGLEPDTEYT VHVRAHVAGV DGPPASVVVR TAPEPVGRVS 780
  781 RLQILNASSD VLRITWVGVT GATAYRLAWG RSEGGPMRHQ ILPGNTDSAE IRGLEGGVSY 840
  841 SVRVTALVGD REGTPVSIVV TTPPEAPPAL GTLHVVQRGE HSLRLRWEPV PRAQGFLLHW 900
  901 QPEGGQEQSR VLGPELSSYH LDGLEPATQY RVRLSVLGPA GEGPSAEVTA RTESPRVPSI 960
  961 ELRVVDTSID SVTLAWTPVS RASSYILSWR PLRGPGQEVP GSPQTLPGIS SSQRVTGLEP1020
 1021 GVSYIFSLTP VLDGVRGPEA SVTQTPVCPR GLADVVFLPH ATQDNAHRAE ATRRVLERLV1080
 1081 LALGPLGPQA VQVGLLSYSH RPSPLFPLNG SHDLGIILQR IRDMPYMDPS GNNLGTAVVT1140
 1141 AHRYMLAPDA PGRRQHVPGV MVLLVDEPLR GDIFSPIREA QASGLNVVML GMAGADPEQL1200
 1201 RRLAPGMDSV QTFFAVDDGP SLDQAVSGLA TALCQASFTT QPRPEPCPVY CPKGQKGEPG1260
 1261 EMGLRGQVGP PGDPGLPGRT GAPGPQGPPG SATAKGERGF PGADGRPGSP GRAGNPGTPG1320
 1321 APGLKGSPGL PGPRGDPGER GPRGPKGEPG APGQVIGGEG PGLPGRKGDP GPSGPPGPRG1380
 1381 PLGDPGPRGP PGLPGTAMKG DKGDRGERGP PGPGEGGIAP GEPGLPGLPG SPGPQGPVGP1440
 1441 PGKKGEKGDS EDGAPGLPGQ PGSPGEQGPR GPPGAIGPKG DRGFPGPLGE AGEKGERGPP1500
 1501 GPAGSRGLPG VAGRPGAKGP EGPPGPTGRQ GEKGEPGRPG DPAVVGPAVA GPKGEKGDVG1560
 1561 PAGPRGATGV QGERGPPGLV LPGDPGPKGD PGDRGPIGLT GRAGPPGDSG PPGEKGDPGR1620
 1621 PGPPGPVGPR GRDGEVGEKG DEGPPGDPGL PGKAGERGLR GAPGVRGPVG EKGDQGDPGE1680
 1681 DGRNGSPGSS GPKGDRGEPG PPGPPGRLVD TGPGAREKGE PGDRGQEGPR GPKGDPGLPG1740
 1741 APGERGIEGF RGPPGPQGDP GVRGPAGEKG DRGPPGLDGR SGLDGKPGAA GPSGPNGAAG1800
 1801 KAGDPGRDGL PGLRGEQGLP GPSGPPGLPG KPGEDGKPGL NGKNGEPGDP GEDGRKGEKG1860
 1861 DSGASGREGR DGPKGERGAP GILGPQGPPG LPGPVGPPGQ GFPGVPGGTG PKGDRGETGS1920
 1921 KGEQGLPGER GLRGEPGSVP NVDRLLETAG IKASALREIV ETWDESSGSF LPVPERRRGP1980
 1981 KGDSGEQGPP GKEGPIGFPG ERGLKGDRGD PGPQGPPGLA LGERGPPGPS GLAGEPGKPG2040
 2041 IPGLPGRAGG VGEAGRPGER GERGEKGERG EQGRDGPPGL PGTPGPPGPP GPKVSVDEPG2100
 2101 PGLSGEQGPP GLKGAKGEPG SNGDQGPKGD RGVPGIKGDR GEPGPRGQDG NPGLPGERGM2160
 2161 AGPEGKPGLQ GPRGPPGPVG GHGDPGPPGA PGLAGPAGPQ GPSGLKGEPG ETGPPGRGLT2220
 2221 GPTGAVGLPG PPGPSGLVGP QGSPGLPGQV GETGKPGAPG RDGASGKDGD RGSPGVPGSP2280
 2281 GLPGPVGPKG EPGPTGAPGQ AVVGLPGAKG EKGAPGGLAG DLVGEPGAKG DRGLPGPRGE2340
 2341 KGEAGRAGEP GDPGEDGQKG APGPKGFKGD PGVGVPGSPG PPGPPGVKGD LGLPGLPGAP2400
 2401 GVVGFPGQTG PRGEMGQPGP SGERGLAGPP GREGIPGPLG PPGPPGSVGP PGASGLKGDK2460
 2461 GDPGVGLPGP RGERGEPGIR GEDGRPGQEG PRGLTGPPGS RGERGEKGDV GSAGLKGDKG2520
 2521 DSAVILGPPG PRGAKGDMGE RGPRGLDGDK GPRGDNGDPG DKGSKGEPGD KGSAGLPGLR2580
 2581 GLLGPQGQPG AAGIPGDPGS PGKDGVPGIR GEKGDVGFMG PRGLKGERGV KGACGLDGEK2640
 2641 GDKGEAGPPG RPGLAGHKGE MGEPGVPGQS GAPGKEGLIG PKGDRGFDGQ PGPKGDQGEK2700
 2701 GERGTPGIGG FPGPSGNDGS AGPPGPPGSV GPRGPEGLQG QKGERGPPGE RVVGAPGVPG2760
 2761 APGERGEQGR PGPAGPRGEK GEAALTEDDI RGFVRQEMSQ HCACQGQFIA SGSRPLPSYA2820
 2821 ADTAGSQLHA VPVLRVSHAE EEERVPPEDD EYSEYSEYSV EEYQDPEAPW DSDDPCSLPL2880
 2881 DEGSCTAYTL RWYHRAVTGS TEACHPFVYG GCGGNANRFG TREACERRCP PRVVQSQGTG2940
 2941 TAQD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	gi\|14317902, gi\|...	No Comments	Cheeseman, I.M., et al. (2004)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: COL7A1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: