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Protein Overview: TAF6

General Information:
Name(s) found: TAF6 [HGNC (HUGO)]
Description(s) found:
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  • gi|51094599|gb|EAL23851.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa [Homo sapiens] [NCBI NR]
  • gi|5032147|ref|NP_005632.1| TBP-associated factor 6 isoform alpha [Homo sapiens] [NCBI NR]
  • gi|437385|gb|AAA63643.1| TAFII70 [Homo sapiens] [NCBI NR]
  • gi|23266704|gb|AAN10295.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa [Homo sapiens] [NCBI NR]
  • gi|21536359|ref|NP_647476.1| TBP-associated factor 6 isoform alpha [Homo sapiens] [NCBI NR]
  • gi|17390254|gb|AAH18115.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa [Homo sapiens] [NCBI NR]
  • gi|1729810|sp|P49848.1|TAF6_HUMAN RecName: Full=Transcription initiation factor TFIID subunit 6; AltName: Full=Transcription initiation factor TFIID 70 kDa subunit; Short=TAF(II)70; Short=TAFII-70; AltName: Full=TAFII-80; Short=TAFII80; AltName: Full=RNA [NCBI NR]
  • gi|119596998|gb|EAW76592.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa, isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|119596997|gb|EAW76591.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa, isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|119596995|gb|EAW76589.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa, isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|1136306|gb|AAA84390.1| TAFII80 [NCBI NR]
  • TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa [HGNC (HUGO)]
  • Transcription initiation factor TFIID subunit 6 OS=Homo sapiens GN=TAF6 PE=1 SV=1 [Swiss-Prot]
  • Transcription initiation factor TFIID 70 kDa subunit [hmr_yeast5_DM3-1_pombe.fasta]
  • TBP-associated factor 6 isoform alpha; TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80 kD; TATA box binding protein (TBP)-associated factor, RNA polymerase II, E, 70/85kD; transcription initiation factor TFIID 70 kD subunit [HMR_022704.fasta]
  • TBP-associated factor 6 isoform alpha [Homo sapiens]gi|51094599|gb|EAL23851.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa [Homo sapiens]gi|5032147|ref|NP_005632.1| TBP-associated factor 6 isoform alpha [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Transcription initiation factor TFIID subunit 6 (Transcription initiation factor TFIID 70 kDa subunit) (TAF(II)70) (TAFII-70) (TAFII-80) (TAFII80) [Yateslab_human_na_07-28-2006_reversed.fasta]
  • Tax_Id=9606 Transcription initiation factor TFIID subunit 6 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_139315) TBP-associated factor 6, isoform alpha; TATA box binding protein (TBP)-associated factor, RNA polymerase II, E, 70/85kD; transcription initiation factor TFIID 70 kD subunit [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • (NM_005641) TBP-associated factor 6, isoform alpha; TATA box binding protein (TBP)-associated factor, RNA polymerase II, E, 70/85kD; transcription initiation factor TFIID 70 kD subunit [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • TBP-associated factor 6 isoform alpha [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • TBP-associated factor 6 isoform alpha; TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80 kD; TATA box binding protein (TBP)-associated factor, RNA polymerase II, E, 70/85kD; transcription initiation factor TFIID 70 kD subunit [H [HumanGallus06162005.fasta]
  • Transcription initiation factor TFIID subunit 6 (Transcription initiation factor TFIID 70 kDa subunit) (TAF(II)70) (TAFII-70) (TAFII-80) (TAFII80) (RNA polymerase II TBP-associated factor subunit E) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa, isoform CRA_b [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • TAFII80 [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • TAFII70 [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • RecName: Full=Transcription initiation factor TFIID subunit 6; AltName: Full=Transcription initiation factor TFIID 70 kDa subunit; Short=TAF(II)70; Short=TAFII-70; AltName: Full=TAFII-80; Short=TAFII80; AltName: Full=RNA polymerase II TBP-associated facto [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • IPI:IPI00028579.3|SWISS-PROT:P49848-1|ENSEMBL:ENSP00000344537;ENSP00000389575;ENSP00000416396|REFSEQ:NP_005632;NP_647476|H-INV:HIT000038274|VEGA:OTTHUMP00000025437;OTTHUMP00000206641;OTTHUMP00000206716;OTTHUMP00000206752 Tax_Id=9606 Gene_Symbol=TAF6 Isofo [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=TAF6 Transcription initiation factor TFIID subunit 6 ENSG00000106290 IPI00376953 IPI00028579 IPI00376952 [drosphohumanreversed.fasta]
  • Tax_Id=9606 Gene_Symbol=TAF6 Transcription initiation factor TFIID subunit 6 [EBI-IPI_human_3.30_06-28-2007_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=TAF6 Isoform 1 of Transcription initiation factor TFIID subunit 6 [EBI-IPI_Human_3.71_03-24-2010_reversed.fasta]
  • transcription initiation factor TFIID subunit 6 isoform alpha [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • P49848;A4D2B2;A4D2B3;Q6AI29; RecName: Full=Transcription initiation factor TFIID subunit 6; AltName: Full=Transcription initiation factor TFIID 70 kDa subunit; AltName: Full=Transcription initiation factor TFIID 80 kDa subunit; AltName: Full=RNA polymerase II TBP-associated factor subunit E; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Isoform 1 of Transcription initiation factor TFIID subunit 6 OS=Homo sapiens GN=TAF6 [011711_HMR.fasta]
  • IPI:IPI00028579.3|SWISS-PROT:P49848-1|ENSEMBL:ENSP00000344537;ENSP00000389575;ENSP00000416396|REFSEQ:NP_005632;NP_647476|H-INV:HIT000038274|VEGA:OTTHUMP00000025437;OTTHUMP00000206641;OTTHUMP00000206716;OTTHUMP00000206752 Tax_Id=9606 Gene_Symbol=TAF6 Isoform 1 of Transcription initiation factor TFIID subunit 6 [ipi.HUMAN.fasta.20100406]
  • GeneSymbol=TAF6 Synonyms=DKFZp781E21155|MGC:8964|TAF(II)70|TAF(II)80|TAF2E|TAFII-70|TAFII-80|TAFII70|TAFII80|TAFII85 transcription initiation factor TFIID subunit 6 isoform alpha [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00028579.3|SWISS-PROT:P49848-1|TREMBL:A4D299|ENSEMBL:ENSP00000344537;ENSP00000389575;ENSP00000416396|REFSEQ:NP_005632;NP_647476|H-INV:HIT000038274|VEGA:OTTHUMP00000206641;OTTHUMP00000206716;OTTHUMP00000206752 Tax_Id=9606 Gene_Symbol=TAF6 Isoform 1 of Transcription initiation factor TFIID subunit 6 [ipi.HUMAN.20110912.fasta]
  • Transcription initiation factor TFIID subunit 6 GN=TAF6 [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 677 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEKKLKLS NTVLPSESMK VVAESMGIAQ IQEETCQLLT DEVSYRIKEI AQDALKFMHM  60
   61 GKRQKLTTSD IDYALKLKNV EPLYGFHAQE FIPFRFASGG GRELYFYEEK EVDLSDIINT 120
  121 PLPRVPLDVC LKAHWLSIEG CQPAIPENPP PAPKEQQKAE ATEPLKSAKP GQEEDGPLKG 180
  181 KGQGATTADG KGKEKKAPPL LEGAPLRLKP RSIHELSVEQ QLYYKEITEA CVGSCEAKRA 240
  241 EALQSIATDP GLYQMLPRFS TFISEGVRVN VVQNNLALLI YLMRMVKALM DNPTLYLEKY 300
  301 VHELIPAVMT CIVSRQLCLR PDVDNHWALR DFAARLVAQI CKHFSTTTNN IQSRITKTFT 360
  361 KSWVDEKTPW TTRYGSIAGL AELGHDVIKT LILPRLQQEG ERIRSVLDGP VLSNIDRIGA 420
  421 DHVQSLLLKH CAPVLAKLRP PPDNQDAYRA EFGSLGPLLC SQVVKARAQA ALQAQQVNRT 480
  481 TLTITQPRPT LTLSQAPQPG PRTPGLLKVP GSIALPVQTL VSARAAAPPQ PSPPPTKFIV 540
  541 MSSSSSAPST QQVLSLSTSA PGSGSTTTSP VTTTVPSVQP IVKLVSTATT APPSTAPSGP 600
  601 GSVQKYIVVS LPPTGEGKGG PTSHPSPVPP PASSPSPLSG SALCGGKQEA GDSPPPAPGT 660
  661 PKANGSQPNS GSPQPAP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 23.522879 TAF(II)62
    2 View Details [156..291] deduced N/A No confident structure predictions are available.
    3 View Details [292..441] Pfam 58.823909 No description for PF07571.1 was found. No confident structure predictions are available.
    4 View Details [442..677] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle