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Protein Overview: gi|14141159, gi|...

General Information:
Name(s) found: gi|7739443 [NCBI NR]
gi|7739440 [NCBI NR]
gi|24981041 [NCBI NR]
gi|158256526 [NCBI NR]
gi|14141159 [NCBI NR]
gi|119574667 [NCBI NR]
Description(s) found:
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  • gi|7739443|gb|AAF68849.1|AF132361_1 hnRNP 2H9A [Homo sapiens] [NCBI NR]
  • gi|7739440|gb|AAF68847.1| hnRNP 2H9A [Homo sapiens] [NCBI NR]
  • gi|24981041|gb|AAH39824.1| Heterogeneous nuclear ribonucleoprotein H3 (2H9) [Homo sapiens] [NCBI NR]
  • gi|158256526|dbj|BAF84236.1| unnamed protein product [Homo sapiens] [NCBI NR]
  • gi|14141159|ref|NP_067676.2| heterogeneous nuclear ribonucleoprotein H3 isoform b [Homo sapiens] [NCBI NR]
  • gi|119574667|gb|EAW54282.1| heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_c [Homo sapiens] [NCBI NR]
  • Splice isoform 2 of P31942 Heterogeneous nuclear ribonucleoprotein H3 [hmr_yeast5_DM3-1_pombe.fasta]
  • heterogeneous nuclear ribonucleoprotein H3 isoform b [HMR_022704.fasta]
  • heterogeneous nuclear ribonucleoprotein H3 isoform b [Homo sapiens]gi|24981041|gb|AAH39824.1| Heterogeneous nuclear ribonucleoprotein H3, isoform b [Homo sapiens]gi|7739443|gb|AAF68849.1| hnRNP 2H9A [Homo sapiens]gi|7739440|gb|AAF68847.1| hnRNP 2H9A [H [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 Splice Isoform 2 of Heterogeneous nuclear ribonucleoprotein H3 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_021644) heterogeneous nuclear ribonucleoprotein H3, isoform b [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • heterogeneous nuclear ribonucleoprotein H3 isoform b [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • unnamed protein product [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • heterogeneous nuclear ribonucleoprotein H3 (2H9), isoform CRA_c [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Heterogeneous nuclear ribonucleoprotein H3 (2H9) [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • hnRNP 2H9A [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 Isoform 2 of Heterogeneous nuclear ribonucleoprotein H3 [EBI-IPI_human_3.23_11-02-2006_con_reversed.fasta]
  • Tax_Id=9606 SPLICE ISOFORM 2 OF HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN H3 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=HNRNPH3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein H3 [human-ipi-250309-contam.fasta]
  • IPI:IPI00216492.1|SWISS-PROT:P31942-2|TREMBL:A8K682|ENSEMBL:ENSP00000346726|REFSEQ:NP_067676|H-INV:HIT000052257|VEGA:OTTHUMP00000019701 Tax_Id=9606 Gene_Symbol=HNRNPH3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein H3 [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=HNRPH3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein H3 [EBI-IPI_human_3.30_06-28-2007_con_reversed.fasta]
  • Isoform 2 of Heterogeneous nuclear ribonucleoprotein H3 OS=Homo sapiens GN=HNRNPH3 [011711_HMR.fasta]
  • IPI:IPI00216492.1|SWISS-PROT:P31942-2|ENSEMBL:ENSP00000346726|REFSEQ:NP_067676|H-INV:HIT000052257|VEGA:OTTHUMP00000019701 Tax_Id=9606 Gene_Symbol=HNRNPH3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein H3 [ipi.HUMAN.fasta.20100406]
  • GeneSymbol=HNRNPH3 Synonyms=2H9|FLJ34092|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 isoform b [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • Isoform 2 of Heterogeneous nuclear ribonucleoprotein H3 GN=HNRNPH3 [Doctor+uniprot-HUMAN-120911.fasta]
  • Isoform of P31942, Isoform 2 of Heterogeneous nuclear ribonucleoprotein H3 OS=Homo sapiens GN=HNRNPH3 [2016-04-human-contam-aPKC-His-Par6.fasta]
    • Organism: Homo sapiens
    Length: 331 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWVMKHNGP NDASDGTVRL RGLPFGCSKE EIVQFFQGLE IVPNGITLTM DYQGRSTGEA  60
   61 FVQFASKEIA ENALGKHKER IGHRYIEIFR SSRSEIKGFY DPPRRLLGQR PGPYDRPIGG 120
  121 RGGYYGAGRG SYGGFDDYGG YNNYGYGNDG FDDRMRDGRG MGGHGYGGAG DASSGFHGGH 180
  181 FVHMRGLPFR ATENDIANFF SPLNPIRVHI DIGADGRATG EADVEFVTHE DAVAAMSKDK 240
  241 NNMQHRYIEL FLNSTPGGGS GMGGSGMGGY GRDGMDNQGG YGSVGRMGMG NNYSGGYGTP 300
  301 DGLGGYGRGG GGSGGYYGQG GMSGGGWRGM Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run gi|14317902, gi|... No Comments Cheeseman, I.M., et al. (2004)
    View Run MIS12 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] PSI-BLAST 12.221849 Solution structure of the first RRM domain in heterogeneous nuclear ribonucleoprotein H
    2 View Details [104..331] FFAS03 4.06 Nuclear ribonucleoprotein A1 (RNP A1, UP1)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.787118623292657 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0269483316710413 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle