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Protein Overview: FAM172A

General Information:
Name(s) found: FAM172A [HGNC (HUGO)]
Description(s) found:
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  • gi|74730707|sp|Q8WUF8.1|F172A_HUMAN RecName: Full=UPF0528 protein FAM172A; Flags: Precursor [NCBI NR]
  • gi|21362018|ref|NP_114431.2| hypothetical protein LOC83989 isoform 1 [Homo sapiens] [NCBI NR]
  • gi|189066523|dbj|BAG35773.1| unnamed protein product [Homo sapiens] [NCBI NR]
  • gi|18089032|gb|AAH20584.1| Family with sequence similarity 172, member A [Homo sapiens] [NCBI NR]
  • gi|119616419|gb|EAW96013.1| chromosome 5 open reading frame 21, isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|119616418|gb|EAW96012.1| chromosome 5 open reading frame 21, isoform CRA_b [Homo sapiens] [NCBI NR]
  • family with sequence similarity 172, member A [HGNC (HUGO)]
  • Protein FAM172A OS=Homo sapiens GN=FAM172A PE=2 SV=1 [Swiss-Prot]
  • Similar to hypothetical protein DKFZp564D172 [hmr_yeast5_DM3-1_pombe.fasta]
  • hypothetical protein DKFZp564D172 [HMR_022704.fasta]
  • hypothetical protein DKFZp564D172 [Homo sapiens]gi|18089032|gb|AAH20584.1| Hypothetical protein DKFZp564D172 [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 Hypothetical protein C5orf21 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_032042) hypothetical protein DKFZp564D172 [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • hypothetical protein LOC83989 [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • Tax_Id=9606 Hypothetical protein DKFZP564D172 [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • hypothetical protein DKFZp564D172 [Homo sapiens] [HumanGallus06162005.fasta]
  • Family with sequence similarity 172, member A [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • UPF0528 protein C5orf21 precursor [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • unnamed protein product [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • chromosome 5 open reading frame 21, isoform CRA_b [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 Chromosome 5 open reading frame 21 [EBI-IPI_human_3.23_11-02-2006_con_reversed.fasta]
  • Tax_Id=9606 HYPOTHETICAL PROTEIN DKFZP564D172 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • RecName: Full=UPF0528 protein FAM172A; Flags: Precursor [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=FAM172A Isoform 1 of UPF0528 protein FAM172A [human-ipi-250309-contam.fasta]
  • hypothetical protein LOC83989 isoform 1 [Homo sapiens] [NCBI-RefSeq_human_na_10-19-2009_con_reversed.fasta]
  • Chromosome 5 open reading frame 21 [Homo sapiens] [nr-271106-contam.fasta]
  • IPI:IPI00102909.2|SWISS-PROT:Q8WUF8-1|TREMBL:B4DLG5|ENSEMBL:ENSP00000379294|REFSEQ:NP_114431|H-INV:HIT000038836|VEGA:OTTHUMP00000162006 Tax_Id=9606 Gene_Symbol=FAM172A Isoform 1 of UPF0528 protein FAM172A [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=C5orf21 Uncharacterized protein C5orf21 ENSG00000113391 IPI00102909 [drosphohumanreversed.fasta]
  • Tax_Id=9606 Gene_Symbol=C5orf21 Uncharacterized protein C5orf21 [EBI-IPI_human_3.30_06-28-2007_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=FAM172A Isoform 1 of Protein FAM172A [EBI-IPI_Human_3.71_03-24-2010_reversed.fasta]
  • Q8WUF8;B2R7C6;Q9H0U8; RecName: Full=Protein FAM172A; Flags: Precursor; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Isoform 1 of Protein FAM172A OS=Homo sapiens GN=FAM172A [011711_HMR.fasta]
  • IPI:IPI00102909.2|SWISS-PROT:Q8WUF8-1|ENSEMBL:ENSP00000379294|REFSEQ:NP_114431|H-INV:HIT000038836|VEGA:OTTHUMP00000162006 Tax_Id=9606 Gene_Symbol=FAM172A Isoform 1 of Protein FAM172A [ipi.HUMAN.fasta.20100406]
  • GeneSymbol=FAM172A Synonyms=C5orf21|DKFZp564D172 hypothetical protein LOC83989 isoform 1 [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00102909.2|SWISS-PROT:Q8WUF8-1|ENSEMBL:ENSP00000379294|REFSEQ:NP_114431|H-INV:HIT000038836|VEGA:OTTHUMP00000162006 Tax_Id=9606 Gene_Symbol=MIR2277;FAM172A Isoform 1 of Protein FAM172A [ipi.HUMAN.20110912.fasta]
  • Protein FAM172A GN=FAM172A [Doctor+uniprot-HUMAN-120911.fasta]
  • Tax_Id=9606 Gene_Symbol=MIR2277;FAM172A Isoform 1 of Protein FAM172A [human-ipi-270911-contam-BSA.fasta]
  • Chromosome 5 open reading frame 21, isoform CRA_b OS=Homo sapiens GN=C5orf21 PE=4 SV=1 [uniprot-human-031015-contam.fasta]
    • Organism: Homo sapiens
    Length: 416 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISLSSLIL LPIWINMAQI QQGGPDEKEK TTALKDLLSR IDLDELMKKD EPPLDFPDTL  60
   61 EGFEYAFNEK GQLRHIKTGE PFVFNYREDL HRWNQKRYEA LGEIITKYVY ELLEKDCNLK 120
  121 KVSIPVDATE SEPKSFIFMS EDALTNPQKL MVLIHGSGVV RAGQWARRLI INEDLDSGTQ 180
  181 IPFIKRAVAE GYGVIVLNPN ENYIEVEKPK IHVQSSSDSS DEPAEKRERK DKVSKETKKR 240
  241 RDFYEKYRNP QREKEMMQLY IRENGSPEEH AIYVWDHFIA QAAAENVFFV AHSYGGLAFV 300
  301 ELMIQREADV KNKVTAVALT DSVHNVWHQE AGKTIREWMR ENCCNWVSSS EPLDTSVESM 360
  361 LPDCPRVSAG TDRHELTSWK SFPSIFKFFT EASEAKTSSL KPAVTRRSHR IKHEEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..190] MSA 3.035985 View MSA. No confident structure predictions are available.
    2 View Details [191..416] PSI-BLAST 4.221849 Crystal Structure of Salicylic Acid-binding Protein 2 (SABP2) from Nicotiana tabacum, NESG Target AR2241


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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