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Protein Overview: YIL082W

General Information:
Name(s) found: YIL082W [SGD]
Description(s) found:
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  • gi|74638320|sp|Q99219.1|YI31A_YEAST RecName: Full=Transposon Ty3-I Gag polyprotein; AltName: Full=Gag3; AltName: Full=Transposon Ty3-2 protein A; Short=TY3A; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=p24; Contains: RecName: Full=Spac [NCBI NR]
  • gi|577132|emb|CAA86712.1| TY3-2 orfA [Saccharomyces cerevisiae] [NCBI NR]
  • gi|45269641|gb|AAS56201.1| YIL082W [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S41555 TyA protein - yeast (Saccharomyces cerevisiae) retrotransposon Ty3.IL [NCBI NR]
  • Transposon Ty3-I Gag polyprotein OS=Saccharomyces cerevisiae GN=TY3A-I PE=3 SV=1 [Swiss-Prot]
  • TY3A Putative pseudo-TY3A [mips]
  • - TY3A - TY3A protein [mips]
  • [DUBIOUS] Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag [SGD]
  • YIL082W, Chr IX from 205632-206504 [yeast_orfs2]
  • Chr IX from 205632-206504 [yeastorf3.fasta]
  • >Q99219 (Q99219) Hypothetical protein [4932.FASTACCERV.txt]
  • TY3-2 orfA [Saccharomyces cerevisiae]gi|45269641|gb|AAS56201.1| YIL082W [Saccharomyces cerevisiae]gi|2120128|pir||S41555 TyA protein - yeast (Saccharomyces cerevisiae) retrotransposon Ty3.IL [nrdb_11152004_Chlamydomonas]
  • YIL082W SGDID:S0001344, Chr IX from 205632-206504, Dubious ORF [yeastflysequest.fasta]
  • (Q99219) TY3-2 orfA protein (YIL082W) [cerv4932.FASTAC]
  • YIL082W SGDID:S000001344, Chr IX from 205632-206504, Dubious ORF, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles [yeast-contam.fasta]
  • TY3-2 orfA [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • YIL082W [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • YIL082W SGDID:S000001344, Chr IX from 205632-206504, Dubious ORF, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag" [yeast-bovrabprots.fasta]
  • [chemostatdb.fasta]
  • Transposon Ty3-I Gag polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3A-I PE=3 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YIL082W SGDID:S000001344, Chr IX from 205635-206507, Genome Release 64-1-1, Dubious ORF, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag" [yeast-030211-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 290 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFMDQIPGG GNYPKLPVEC LPNFPIQPSL TFRGRNDSHK LKNFISEIML NMSMISWPND  60
   61 ASRIVYCRRH LLNPAAQWAN DFVQEQGILE ITFDTFIQGL YQHFYKPPDI NKIFNAITQL 120
  121 SEAKLGIERL NQRFRKIWDR MPPDFMTEKA AIMTYTRLLT KETYNIVRMH KPETLKDAME 180
  181 EAYQTTALTE RFFPGFELDA DGDTIIGATT HLQEEYDSDY DSEDNLTQNR YVHTVRTRRS 240
  241 YNKPMSNHRN RRNNNASREE CIKNRLCFYC KKEGHRLNEC RARKASSNRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen PTC4 YIL082W 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] MSA 1.003994 View MSA. No confident structure predictions are available.
    2 View Details [193..290] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle