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Protein Overview: RK23_SACHY

General Information:
Name(s) found: RK23_SACHY [Swiss-Prot]
Description(s) found:
Found 3 descriptions.
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  • 50S ribosomal protein L23, chloroplastic OS=Saccharum hybrid GN=rpl23-A PE=3 SV=1 [Swiss-Prot]
    • Organism: Saccharum sp.
    Length: 93 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGIKYAVFT EKSLRLLGKN QYTFNVESGF TKTEIKHWVE LFFGVKVVAV NSHRLPGKGR  60
   61 RMGPILGHTM HYRRMIITLQ PGYSIPLLDR ETN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] PSI-BLAST 28.30103 50S subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  3.53227268665795 bayes_pls_golite062009
  • structural molecule activity
    		•  3.24319212599242 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0217942967105049 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle