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Protein Overview: SMC3_ARATH

General Information:
Name(s) found: SMC3_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Structural maintenance of chromosomes protein 3 OS=Arabidopsis thaliana GN=SMC3 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1204 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    cohesin complex [ISS]
    Biological Process: sister chromatid cohesion [IMP]
    chromosome segregation [ISS]
    Molecular Function: ATP binding [IEA][ISS]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIKQVIIEG FKSYKEQVAT EEFSNKVNCV VGANGSGKSN FFHAIRFVLS DIYQNLRSED  60
   61 RHALLHEGAG HQVVSAFVEI VFDNSDNRFP VDKEEIRLRR TVGLKKDDYF LDGKHITKGE 120
  121 VMNLLESAGF SRANPYYVVQ QGKIASLTLM KDIERLDLLK EIGGTRVYEE RRRESLRIMQ 180
  181 ETGNKRKQII EVVHYLDERL RELDEEKEEL RKYQQLDKQR KSLEYTIYDK ELHDAREKLE 240
  241 QVEVARTKAS EESTKMYDRV EKAQDDSKSL DESLKELTKE LQTLYKEKET VEAQQTKALK 300
  301 KKTKLELDVK DFQDRITGNI QSKNDALEQL NTVEREMQDS LRELEAIKPL YESQVDKENQ 360
  361 TSKRINELEK TLSILYQKQG RATQFSNKAA RDKWLRKEIE DLKRVLDSNT VQEQKLQDEI 420
  421 LRLNTDLTER DEHIKKHEVE IGELESRISK SHELFNTKKR ERDEEQRKRK EKWGEESQLS 480
  481 SEIDKLKTEL ERAKKNLDHA TPGDVRRGLN SIRRICADYR INGVFGPLVE LVDCDEKFFT 540
  541 AVEVTAGNSL FNVVVENDDI STKIIRHLNS LKGGRVTFLP LNRIKAPRVN YPKDSDAIPL 600
  601 LKKLKFDSKF EPALGQVFGR TVVCRDLNVA TRVAKNDDLD CITMEGDQVS RKGGMTGGFY 660
  661 DHRRSKLRFM NIIMQNTKSI NEKEKELEDV RRQLQVIDQQ ITQLVTEQQR LEADWTLCKL 720
  721 QVEQLKQEIA NANKQKHAIH KAIEYKEKLL GDIRTRIDQV RSSMSMKEAE MGTELVDHLT 780
  781 PEEREQLSKL NPEIKDLKEK KFAYQADRIE RETRKAELEA NIATNLKRRI TELQATIASI 840
  841 DDDSLPSSAG TKEQELDDAK LSVNEAAKEL KSVCDSIDEK TKQIKKIKDE KAKLKTLEDD 900
  901 CKGTLQDLDK KLEELFSLRN TLLAKQDEYT KKIRGLGPLS SDAFDTYKRK NIKELQKMLH 960
  961 RCSEQLQQFS HVNKKALDQY VNFTEQREEL QNRQAELDAG DEKIKELITV LDQRKDESIE1020
 1021 RTFKGVAHHF RDVFSELVQD GYGNLIIMKK KDLDNDDEDD DDDDGGREAV TEGRVEKYIG1080
 1081 VKVKVSFTGQ GETQLMKQLS GGQKTVVALA LIFAIQRCDP APFYLFDEID AALDPQYRTA1140
 1141 VGNLIRRLAD DYGTQFITTT FRPELVRVAD KIYGVFHKNR VSIVNVISKD QALDFIEKDQ1200
 1201 SHDT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] PSI-BLAST 46.522879 Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases.
    2 View Details [67..361] PSI-BLAST 21.30103 Heavy meromyosin subfragment
    3 View Details [362..477] PSI-BLAST 10.30103 Tropomyosin
    4 View Details [478..676] PSI-BLAST 11.0 Smc hinge domain
    5 View Details [677..947] PSI-BLAST 11.0 Tropomyosin
    6 View Details [948..1014] PSI-BLAST 7.522879 No description for 2dfsA was found.
    7 View Details [1015..1204] PSI-BLAST 23.69897 Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle