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Protein Overview: gi|215740796, gi...

General Information:
Name(s) found: gi|57900163 [NCBI NR]
gi|222619931 [NCBI NR]
gi|215740796 [NCBI NR]
gi|215697542 [NCBI NR]
gi|115442427 [NCBI NR]
gi|113535024 [NCBI NR]
Description(s) found:
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  • gi|57900163|dbj|BAD88248.1| putative UMP-kinase [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222619931|gb|EEE56063.1| hypothetical protein OsJ_04876 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215740796|dbj|BAG96952.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215697542|dbj|BAG91536.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115442427|ref|NP_001045493.1| Os01g0965400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113535024|dbj|BAF07407.1| Os01g0965400 [Oryza sativa Japonica Group] [NCBI NR]
  • Os01g0965400 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative UMP-kinase [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 351 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAAAVA CGMSTSFLIR LSPSPPASSH VPLPRSPASS ARPRRASSVS LSTAPRPRAR  60
   61 AAGSDSPSNF GGQTSLMPPF SLMLDEGSRS KKPYRWQRVL LKVSGEALAG DHTENIDPKI 120
  121 TMAIAREVAS VTRLGVEVAI VVGGGNIFRG ASWAGCSGLD RSSADYIGML ATVMNAIFLQ 180
  181 ATMESIGIPT RVQTAFRMSE VAEPYIRRRA VRHLEKGRVV IFAAGTGNPF FTTDTAAALR 240
  241 CAEINAEVVL KATNVDGVYD ADPKRNPNAR LLEAVSYHEV QTRDLSVMDM TAITLCQENN 300
  301 IPVVVFNLQK PGNIAKAIVG EKVGTFIGCT KDQDQIVGNA LDQERRLVNE L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] deduced N/A No confident structure predictions are available.
    2 View Details [96..351] PSI-BLAST 59.39794 The structure of E. coli UMP kinase in complex with UMP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • kinase activity
    		•  5.43826659128409 bayes_pls_golite062009
  • nucleobase, nucleoside, nucleotide kinase activity
    		•  4.76215533422168 bayes_pls_golite062009
  • nucleotide kinase activity
    		•  4.36245911991838 bayes_pls_golite062009
  • phosphotransferase activity, phosphate group as acceptor
    		•  4.17538459617947 bayes_pls_golite062009
  • uridylate kinase activity
    		•  3.54453921304057 bayes_pls_golite062009
  • catalytic activity
    		•  3.20382750184555 bayes_pls_golite062009
  • transferase activity
    		•  2.54481238004476 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.89315414622708 bayes_pls_golite062009
  • phosphotransferase activity, carboxyl group as acceptor
    		•  1.02979719559565 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle