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Protein Overview: gi|57899478, gi|...

General Information:
Name(s) found: gi|57900579 [NCBI NR]
gi|57899478 [NCBI NR]
Description(s) found:
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  • gi|57900579|dbj|BAD87031.1| putative pyrophosphate-dependent phosphofructo-1-kinase [Oryza sativa Japonica Group] [NCBI NR]
  • gi|57899478|dbj|BAD86939.1| putative pyrophosphate-dependent phosphofructo-1-kinase [Oryza sativa Japonica Group] [NCBI NR]
  • putative pyrophosphate-dependent phosphofructo-1-kinase [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 560 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHIILPKE EEAALGVAVE EDHDSPAAPG YQHQQGPPVA KALPFSATCV RISRDSYPNL  60
   61 RALRNASAMS LPDDDAAYAK LEEGDYGYLL DDVPHFTDYL SDLPTFPNPL QDHPAYSTVK 120
  121 QYFVNADDTV PEKVVVQKDS PRGVHFRRAG PRQRVYFESE DVKACIVTCG GLCPGLNTVI 180
  181 RELVCGLSHM YNVNDIFGIQ NGYKGFYSSN YLPMTPKSVN DIHKRGGTVL GTSRGGHDTK 240
  241 KIVDNIQDRG INQVYIIGGD GTQKGAYEIY KEIRRRGLKV AVAGVPKTID NDIAVIDKSF 300
  301 GFDSAVEEAQ RAIDAAHVEA SSAENGIGLV KLMGRYSGFI AMYATLASRD VDCCLIPESP 360
  361 FYLEGEGGLF EYIEKRLKEN NHMVIVVAEG AGQDLIAKSI AAADQIDASG NKLLLDVGLW 420
  421 LTHKIKDYCK NKKMEMTIKY IDPTYMIRAI PSNASDNVYC TLLAHSAIHG AMAGYSFTVG 480
  481 MVNGRHAYIP FHRVTSTRNK VKITDRMWAR LLSSTNQPSF LSQKDIDAAR EADKLASKSP 540
  541 VPVNTKEHGE NVKKPANGEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] FFAS03 1.02 Trigger factor PPIase domain
    2 View Details [83..560] PSI-BLAST 89.522879 No description for 2higA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.308398981319514 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle