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Protein Overview: LSD1_SCHPO

General Information:
Name(s) found: LSD1_SCHPO [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • Lysine-specific histone demethylase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lsd1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 1000 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDLSSKDAL SDVLKDTHAQ SSDPSLWAIF GHQSSDNVHE GGNESVSVEQ EIFDLSQLSE  60
   61 RPVSETVSKA SIPTNINGLS QVKPSALEKS QEVLSLQKLP IKGRRPAGRR GRPALNTSNS 120
  121 LERNGTRYVS AEAPISVKSS IPAIPRVTFE RLCYESAIAS NLPPNALSPL EAEMLSEILE 180
  181 NPTWLSLYLS IRNGICYLWH RNPTLYVSFN EALGIVREKK AFPLASLAFE FLSRNGHINY 240
  241 GCIYIISSLK LDESLSQKTV AIIGAGMAGI SCARQLTNLF AQYEQDFLSR GEKPPRIVIY 300
  301 EASERLGGHI YTHMVPLSDN EVSEKSSLAT TVNATNECMV NLLTDSLIGM PTLDSDPLYI 360
  361 ISSQQLSLDA VHTRNREFIL HDIENGRIDT EHVQRIFRLF DALLFYFNAS ASKQPLHSLI 420
  421 TPPEQEFIQK LDQIGWYISI EAFPLQIKDT LSEFLGNSAN TLTSLLHLTV LDLKIFEWFK 480
  481 EYLSQSLSVS LENVYPGSIP NLNLLLGENV ASYSFKHGMA DMLNSLASTP SPLPILFDQC 540
  541 VHTVKLEDNT VNLSFVNETT VSVDKVVICI PMDKLNTHLI TFEPPLEEKK LKAIDRCHFT 600
  601 NVKKVILIFK TQFWEPNISI FGSLPQDSGR NFIFNDCTRF YEHPTLSVFV KVEGIDFMKD 660
  661 DDIVNGIVSQ LKKVYKPKSE AINPIRTIIS NWENNSYTNH SSYQISNLFL EEDYAILSEP 720
  721 IDNTVFFASE AISQKNSGSI RGAFDSGILA ARDVLASLIG NVVLPNTLVI EENLEQPRKT 780
  781 YGTKRNAQQA LGKEGERENK EKRISYHTEY LRLRQKRLDK EQQECDLLIA ELLGPSPVPP 840
  841 SRPSANPYLL YQKTQWHVCK TLADQDKQRV TGDPEARATK NEIRAKLGKT WRALDSLGKQ 900
  901 PWVDEINARR ANYSTRLEEY QRQINSYNVR VAQIKSEHQR RCESQPIPED EAKLKLLAEQ 960
  961 EDEHLHPEKE GMSVENSDDD YHDDLDYEDS ISEVFPDNFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] MSA 1.065995 View MSA. No confident structure predictions are available.
    2 View Details [107..235] Pfam 26.161151 No description for PF04433.4 was found. No confident structure predictions are available.
    3 View Details [236..785] PSI-BLAST 74.0 The structure basis of specific recognitions for substrates and inhibitors of rat monoamine oxidase A
    4 View Details [786..1000] PSI-BLAST 4.045757 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

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