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Protein Overview: gi|222619145, gi...

General Information:
Name(s) found: gi|56784761 [NCBI NR]
gi|56784129 [NCBI NR]
gi|222619145 [NCBI NR]
gi|215767007 [NCBI NR]
gi|115439497 [NCBI NR]
gi|113533559 [NCBI NR]
Description(s) found:
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  • gi|56784761|dbj|BAD81934.1| SPP30-like [Oryza sativa Japonica Group] [NCBI NR]
  • gi|56784129|dbj|BAD81514.1| SPP30-like [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222619145|gb|EEE55277.1| hypothetical protein OsJ_03203 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215767007|dbj|BAG99235.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115439497|ref|NP_001044028.1| Os01g0708600 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113533559|dbj|BAF05942.1| Os01g0708600 [Oryza sativa Japonica Group] [NCBI NR]
  • Os01g0708600 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • SPP30-like [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 194 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGVGKAKQY ANVLDKPLSR GRQEVSLSAF AFLFSELVQY NQTQVDNIAE LERRLEDAGY  60
   61 AVGARVLELL CHREKGNRRE TRLLGILSFI HSTVWKVLFG KVADSLEKGT EHEDEYMISE 120
  121 KELLVNRFIS VPKDMGAFNC GAFVAGIVRG VLENAGFPAV VTAHFVPIEG QQRPRTTILI 180
  181 KFAEEVLQRE ARFG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] PSI-BLAST 55.69897 No description for 2j3wB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • Rab guanyl-nucleotide exchange factor activity
    		•  5.6079912636527 bayes_pls_golite062009
  • binding
    		•  1.59771877750275 bayes_pls_golite062009
  • protein binding
    		•  1.1027485517601 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle