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Protein Overview: gi|222866228, gi...

General Information:
Name(s) found: gi|60327633 [NCBI NR]
gi|224142954 [NCBI NR]
gi|222866228 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|60327633|gb|AAX19056.1| class III HD-Zip protein 7 [Populus trichocarpa] [NCBI NR]
  • gi|224142954|ref|XP_002324794.1| predicted protein [Populus trichocarpa] [NCBI NR]
  • gi|222866228|gb|EEF03359.1| predicted protein [Populus trichocarpa] [NCBI NR]
    • Organism: Populus trichocarpa
    Length: 823 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNGKYVRYT PEQVEALERL YHECPKPTST RRQQLIRECP ILSHIEPKQI KVWFQNRRCR  60
   61 EKQRKEASRL QAVNRKLTAM NKLLMEENDR LQKQVSQLVY ENSYFRQQTQ NATTLATTDT 120
  121 SCESVVTSGQ HRLTPQHPPR DASPAGLLSI AEENLAQFLS KATGTAVEWV QMPGMKPGPD 180
  181 SIGIVAISHG CTGVAARACG LVGLEPTRVA EILKDRPSWF RDCRAVDVIN AMSTANGGTI 240
  241 ELLYMQLYAP TTLAPARDFL LLRYTSVLED GSLVVCERSL NNTQNGPSMP PTQHFVRAEM 300
  301 LPSGYLIRPC EGGGSIIHIV DHMDLEPWSV PEVLRPLYES STLLAQKTTM AALRHLRQIS 360
  361 QEISQPNVTG WGRRPAALRA LSQRLSKGFN EAVNGFADEG WSLLESDGID DVTVLVNSSP 420
  421 TKTMGVNFSY DNGFPSMNNA VLCAKASMLL QNVPPAILLR FLREHRSEWA DNGIDAYAAS 480
  481 AIKAGPCSLP VSRAGNFGGQ VILPLAHTIE NEEAKVIKLE NMGYREDMLM PGDVFLLQLC 540
  541 SGVDENAVGT CAELIFAPID ASFSDDAPII PSGFRIIPLD SGMDASSPNR TLDLASALEV 600
  601 GPAGNRASGD LSGRSGCTKS VMTIAFQFAF EMHLQENVAS MARQYVRSII ASVQRVALAL 660
  661 SPSHFGSHAG FWPPHGTPEA HTLARWICES YRIYLGVKLL KNEGSDSILK TLWHHSDALV 720
  721 CCSLKTLPVF TFSNQAGLDM LETTLVALQD ITLEKIFDDN GRKTLCSEFP QIMQQGFMCL 780
  781 PGGICLSSMG RPVSYERAVA WKVLNEEESA HCICFMFMNW SFV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] PSI-BLAST 20.09691 DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
    2 View Details [134..372] PSI-BLAST 32.0 No description for 2psoA was found.
    3 View Details [373..540] MSA 1.060979 View MSA. No confident structure predictions are available.
    4 View Details [541..668] deduced N/A No confident structure predictions are available.
    5 View Details [669..823] Pfam 92.958607 No description for PF08670.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle