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Protein Overview: coil-PD

General Information:
Name(s) found: coil-PD / FBpp0100132 [FlyBase]
Description(s) found:
Found 16 descriptions.
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  • The gene coilin is referred to in FlyBase by the symbol Dmel\coil (CG8710, FBgn0033265). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:4012486..4014747. It has the cytological map location 44B3. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: Cajal body organization. 8 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 634 amino acids

    Gene Ontology:
    Cellular Component: nuclear body [IDA]
    Cajal body [IDA]
    nucleoplasm [IDA]
    Biological Process: Cajal body organization [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQHSSMKVDL SNFFKDERRN SLVFIDAAWN NIKDLQDHIQ NLFSLKDISL LTSDGCYLPP  60
   61 RESIKVLNSA EGLKAFRFAS HDSDTFVSPA PVKSSKKRKN RSVEEQVHLT ASTPLRPSKR 120
  121 SKNQNNSEWI NIAENPSRVR KKELLDMAPG PSVQSKLLTN KGTPKAPETQ TEVSNMSANI 180
  181 ETENKESAPQ IKNKSKNKKP TKSPEASDQV ENEPAPKSIS RCTLKEGKMS ESKNQETSPD 240
  241 ILSEKSGVVT KENETREEQQ DKTHLESNKI PDKLSQLKAG DQIEKSPGIA ASLLSISFRS 300
  301 PLLEMPFNVP RIFQFPTKKQ QIEILEYKKL KPISPRFLLQ KGAKSDDTAK QFPSNGKDST 360
  361 LKPKSYEILH DEELPDVKDK KNVSEGIKRA VAPLCEDIIE TSTTLPGAIG AVESAYLDNS 420
  421 TEAETTLPSE AEATNPLELT ESFLQNNTSM EKTPKVEKIL PDDGSASPIK NNVDSKDVKT 480
  481 VTVPIFEEQL VSDSDDDVML VDDSNIDVSY GDSDIEPIPV VENRQSLDII RDLLRTATPL 540
  541 NSLPSRGDTV IFKLLKIKGN ANSGTTEFVA GRCTYVNRRT KIVTVETITY PPEIGRMLRQ 600
  601 YYMSGLDESS EDVRTLSIHL KDMLEAKIIV ATID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] MSA 1.233991 View MSA. No confident structure predictions are available.
    2 View Details [228..362] deduced N/A No confident structure predictions are available.
    3 View Details [363..515] deduced N/A No confident structure predictions are available.
    4 View Details [516..634] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle