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Protein Overview: CG11155-PA, FBpp...

General Information:
Name(s) found: FBpp0305854 [FlyBase]
CG11155-PA / FBpp0088259 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • type=protein; loc=4:join(1147376..1147378,1147435..1147567,1147628..1148041,1149115..1149281,1150061..1150114,1150192..1150356,1150651..1150809,1151009..1151212,1151819..1152022,1152115..1152219,1152327..1152584,1154501..1154698,1155720..1156110,1156165..1156442); ID=FBpp0305854; name=CG11155-PD; parent=FBgn0039927,FBtr0333701; dbxref=REFSEQ:NP_726649,GB_protein:AAN06582,FlyBase:FBpp0305854,FlyBase_Annotation_IDs:CG11155-PD; MD5=858c17f03a8229748c9f7c8b6b81b2aa; length=910; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG11155 (CG11155, FBgn0039927). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 4:1147233..1156547. It has the cytological map location 102F8. Based on sequence similarity, it is predicted to have molecular function</span>: kainate selective glutamate receptor activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: ion transport. 2 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 910 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    outer membrane-bounded periplasmic space [IEA]
    Biological Process: ion transport [IEA]
    Molecular Function: kainate selective glutamate receptor activity [ISS]
    ionotropic glutamate receptor activity [IEA]
    extracellular-glutamate-gated ion channel activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRKKREIVI KENIQGRSYL KKICCSYIIL SILVISNALP PVIRVGAIFT EDERESSIES  60
   61 AFKYAIYRIN KEKTLLPNTQ LVYDIEYVPR DDSFRTTKKV CSQLEAGVQA IFGPTDALLA 120
  121 SHVQSICEAY DIPHIEGRID LEYNSKEFSI NLYPSHTLLT LAYRDIMVYL NWTKVAIIYE 180
  181 EDYGLFNLMH SSTETKAEMY IRQASPDSYR QVLRAIRQKE IYKIIVDTNP SHIKSFFRSI 240
  241 LQLQMNDHRY HYMFTTFDLE TYDLEDFRYN SVNITAFRLV DVDSKRYLEV INQMQKLQHN 300
  301 GLDTINGSPY IQTESALMFD SVYAFANGLH FLNLDNHQNF YIKNLSCTSD QTWNDGISLY 360
  361 NQINAAITDG LTGTVQFVEG RRNIFKLDIL KLKQEKIQKV GYWHPDDGVN ISDPTAFYDS 420
  421 NIANITLVVM TREERPYVMV KEDKNLTGNL RFEGFCIDLL KAIATQVGFQ YKIELVPDNM 480
  481 YGVYIPETNS WNGIVQELME RRADLAVASM TINYARESVI DFTKPFMNLG IGILFKVPTS 540
  541 QPTRLFSFMN PLAIEIWLYV LAAYILVSFA LFVMARFSPY EWKNPHPCYK ETDIVENQFS 600
  601 ISNSFWFITG TFLRQGSGLN PKATSTRIVG GCWFFFCLII ISSYTANLAA FLTVERMISP 660
  661 IESASDLAEQ TEISYGTLEG GSTMTFFRDS KIGIYQKMWR YMENRKTAVF VKTYEDGIKR 720
  721 VMEGSYAFLM ESTMLDYAVQ RDCNLTQIGG LLDSKGYGIA TPKGSPWRDK ISLAILELQE 780
  781 KGIIQILYDK WWKNTGDVCN RDDKSKESKA NALGVENIGG VFVVLLCGLA LAVVVAIFEF 840
  841 CWNSRKNLNT ENQSLCSEMA EELRFAMHCH GSKSRHRPRK RSCLNCSSVP TYVPSNVSTS 900
  901 NVGVYYNYFN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..503] PSI-BLAST 42.69897 No description for 2e4uA was found.
    2 View Details [504..591] FFAS03 2.17 Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid
    3 View Details [592..807] PSI-BLAST 33.0 Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid
    4 View Details [808..910] MSA 1.353994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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