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Protein Overview: gi|77549370, gi|...

General Information:
Name(s) found: gi|77549370 [NCBI NR]
gi|62732746 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|77549370|gb|ABA92167.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|62732746|gb|AAX94865.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 2315 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLTKNAAR RVTLRRRRAG LIKKVTELSI LCSVQASIVV YNIDEAGDPV VWPSIEEAKN  60
   61 MWSKLMDMSE ATQKKWMQDS KTLLQQQIMK LNKKLDNLKA ENYKREITNI ISQIGGGHRK 120
  121 NLNDLSPEMV KNVKREVAKL REAIRNRIIK LHAQVIEKCI DYIIFSMMDR QWMYVDRRSK 180
  181 EFIDGVHYFL RVAEANRQRG FICCPCNKCK NQKEYSASRT IHFHLFESGF MPSYNCWTSH 240
  241 GEQGVEMEEN EVEDDNIPDF AQYVGFEGNQ TGEEEIAADG NDVADDLGQM LQDAREDCES 300
  301 EKEAHKLDKI LEDHRTSLYP GCEQGHKKLD TTLELLQWKA KNGVSDKAFG DLLKLVKNIL 360
  361 PGGNKLPETT YEAKKIVCPL GLEVHKIHAC PNDCILYRGE EYENLEACPV CKALRYKIRR 420
  421 DDPGEVDGQL TKKRIPAKVM WYLPIIPRLR RLFRNKGNAR MLRWHAEERQ QDGMLRHPAD 480
  481 GSQWRNIDRK FKEFGKDARN IRFGLSTDGM NPFGEMSSGH STWPVTMCIY NLPPWLCMKR 540
  541 KYIMMLIIIQ GPKQPGNDID VYLRPLVEDL KQLWKKEGVP VWDEDKQEEF NLRALLFVAI 600
  601 NDWPALSNLS GQSNKGYKAC THCMDETEST YLKHCRKVVY MGHRRFLAAN HPVRKKGKHL 660
  661 EHKADHRTKP KHRSRKTVFA MVKDLKVVFG KGPGSQHIES EDGHAAMWKK NSIFWELPYW 720
  721 EFLDVRHAID VMHLTNNLCV NLLGFLGVYG KSKDTLEARN DLKHMEQRGD LHPEPKEKGS 780
  781 HYLSPASYTL SKAEKESMFE CLESIKVPSG YSTNIKRIIS TKEKKFTNLK SHDCHVLMTQ 840
  841 LLPVVIRGII PDNVRATITK LCAFMNAISQ KVIDPDRLEA LQNEVVQCLV SFELIFPPSF 900
  901 FNIMTHLLCH LVKEIRILGP MYLHNMFPFE RYMGVLKKYV RTRARPEASI AKGYGTEEVI 960
  961 EFCVEFIEDL RPIGVPESRH EGRLRGKGTL GRKAITTVDN NLFSKAHFTV LQHSSLVAPY1020
 1021 IEEHLALVRA RNIGKSDAWI TRHHIDTFPA WLQQHLMGNE SINQQLAFLA RGPSGSIATF1080
 1081 QGYEINGYTF YTRAQDMKST NQNSAVRVDA MGHNGTTATY YGAIEDIWEL DYGPLKVPLF1140
 1141 RCQWVRLTGG GVMIDDSGMT TVDLNKVGYS DEPFVLANDV TQVFFVKDMS SKGKKGRGPD1200
 1201 EPKRQVVLPG KRKIVGVEDK TDEDYDQLDG QPPFTVTIDP SILLSNEDTP YSRSDHKEGT1260
 1261 IMADRDEEQI LYDTIAEGSS QYWNEEEGNE DPNQYLNEEG NVERDAEGNQ QGHVEWDVEG1320
 1321 NQEEEASGSQ PSVGQKRARG QRGAAKKLEG RHIITEVEED GRPSAPAEAA KNYVRHSGWV1380
 1381 VRDNVPVSTV YWRRTRARGD HESFVPDSEK EMLWTTMLET FTLPAGIEDK VKRWTLKKMA1440
 1441 EQFQSFKGDL YQKYILKGQT PNFDTFPKLR DHWDEFVAYK TGEQGQAMME RNKENAAKKK1500
 1501 YHHHLGSGGY SVAMPKWEQM EASLIERGIE PATANWPERS KFWYYAHGGT LNPADGSLVF1560
 1561 GDQIREAARR LTDAVEASSQ GTFRPDRDRD ELTLALQTPE HPGRTRGKGV IPWKIGFKED1620
 1621 IHTYRSRMRS KRDTEAKIAD LEFRVSSYEL NMQEEVARKV DERMAAHRSH DPQPTIPPAM1680
 1681 VSPSGNRSSC ASTGQVGSQS MDAMQTQDES TCPVDDITQR TPCELHIPFK NLSIKVASGM1740
 1741 AIPTDPSGTY HCRPIPAGYS KVEVKLVEGA YEDLELDYPG GDGETHLRDT CHAIILWRRR1800
 1801 YIILPGRQAA SRAPSPPAPP SPPQDPAPSP PHAPPAPSPP QAPASTPPQD PAPTPPRAPT1860
 1861 PTPPQAPLPA PSKSRAPPAP PPAHTRATKK AKVDAAKNKD PRYDCTQEEL DAYVASEVKR1920
 1921 QFKPRSPEKK IPIDPSVRNF FRGMSASVKE AIKLSDYERT LKKASSGKSK PVPQLGEQPN1980
 1981 QEIEPLVTGK EMTIEQFITD TGLTTDQLLG VAPIEKAEVK YMYELGKPLV KPELLQSLPT2040
 2041 QMYKFHQLYM EMSATGREMI GARIRDTDFL QGDDILWINF RVIYELYQLD ALDVSIMSCW2100
 2101 ILMEIQRARR RRVFDTGFID PRKVNVAMLD QYPQETEDNL VHLLKAQHYK TFILLPYNTE2160
 2161 FHWVLLLFDL EACTVNVYDS MDKKESTFDK VFEVIDRAWY RFRHLVRGKW RERLRRKFKF2220
 2221 PCAKQKQGTN LCGYYVCEYC HCLVYQIITT RELDFIHMRD NLTTHKEFIA AVQEQLMGFI2280
 2281 NEEILDPKGE FYYDGNTIHR SLASELAATT TTSKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] PSI-BLAST 19.045757 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [158..300] MSA 2.252983 View MSA. No confident structure predictions are available.
    3 View Details [301..393] deduced N/A No confident structure predictions are available.
    4 View Details [394..574] deduced N/A No confident structure predictions are available.
    5 View Details [575..754] deduced N/A No confident structure predictions are available.
    6 View Details [755..850] deduced N/A No confident structure predictions are available.
    7 View Details [851..940] deduced N/A No confident structure predictions are available.
    8 View Details [941..1171] MSA 1.321959 View MSA. No confident structure predictions are available.
    9 View Details [1172..1271] deduced N/A No confident structure predictions are available.
    10 View Details [1272..2056] PSI-BLAST 3.39794 No description for 1y0fB was found.
    11 View Details [2057..2315] PSI-BLAST 5.30103 No description for 2iycA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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