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Protein Overview: SYF1_SCHPO

General Information:
Name(s) found: SYF1_SCHPO [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • Pre-mRNA-splicing factor cwf3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 790 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDVIPLKVN FDLINVDDEP FELELLRDPY SLKSWLRYIK THEGSTLEKR VLLFERACSE  60
   61 LPGSYKIWKS YLELRVAHVE HLNPYFHAEA FASVNDCFER SLILLHKMPV IWKLYLQFLM 120
  121 KQPNVTKIRC TFNSALRALP VTQHDDIWDM FTKYAEDIGG LFCIHVYRRY IQVEPRAIEN 180
  181 YIEILCKLGL WNEAARQYED ILNRPVFLSA KRKSNYQIWL EFSELVVQHP DHTQNIDVEK 240
  241 VFRAGIKRFS DQAGKLWTYL AQYYIRIGDY EKARSTFYEG MNNIMTVRNF TIIFDAFVEF 300
  301 EEQWLSARVE ASSGNANDEL SIDFHMAWLE KILDKRPLYI NDVLLRQNIN NVDEWLRRVK 360
  361 FLEDDSEKVV QVYTDAIKNV NPKLAHGSLG KLFSEFARFY ENFDDLEQSR IIFEKATHVP 420
  421 YKTVNELAQV WIDWAEMELR HQNFDAARKL IGDAVHAPRK SHISFFDESL SPQVRLHKSS 480
  481 KIWMYYLDLE ESVGTIETTR KLYDRVFELK IATPQVVVNY ANLLEENAYF EDSFKIYERG 540
  541 VALFSYPVAF ELWNLYLTKF VKRYQGTHME RTRDLFEQAL EGCPPEFSKS IYLLYADFEE 600
  601 KFGKAKRSIS ILEKAADKVK TADRLAIYNV LLVKVALNYG VLATRTVYEK AIESLSDSEV 660
  661 KDMCLRFAEM ETKLGEIDRA RLIYIHGSQY CDPRVETDYW KAWQEFEIRY GNPEETVKEM 720
  721 LRIKRSVQTK FSTDSLHIAK RAAKIESAAA PMDPMEQLEM EKSEGPKALA GFVLSKSNPQ 780
  781 ETSKITGEEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..586] PSI-BLAST 16.154902 No description for 2gw1A was found.
    2 View Details [587..790] PSI-BLAST 44.39794 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle