Protein Overview: gi|162354213, gi...

General Information:
Name(s) found:	gi\|77635817 [NCBI NR] gi\|162421398 [NCBI NR] gi\|162354213 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|77635817\|ref\|ZP_00797897.1\| COG0608: Single-stranded DNA-specific exonuclease [Yersinia pestis Angola] [NCBI NR] gi\|162421398\|ref\|YP_001608156.1\| ssDNA exonuclease RecJ [Yersinia pestis Angola] [NCBI NR] gi\|162354213\|gb\|ABX88161.1\| single-stranded-DNA-specific exonuclease RecJ [Yersinia pestis Angola] [NCBI NR]
Organism:	Yersinia pestis Angola
Length:	577 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLKTQLRRR EAADDSHLPA QLPPLLRRLY ASRGVKDAQE LERGVKGLLA WQKLDGIDAG  60
   61 VTLLQQALAD RRRIVIVGDF DADGATSTAL AVLALRSMGG SNLDYLVPNR FEDGYGLSPE 120
  121 VVEQVAARGA ELIVTVDNGI SSHAGVDLAH AKGIQVLVTD HHLPGETLPA ADAIINPNLA 180
  181 GCDFLSKSLA GVGVTFYLML ALRARLRECG WFEQRTLAVP NLAELLDLVA LGTVADVVPL 240
  241 DANNRILVHQ GLSRIRAGKC RPGIRALLEV ANRDARQLVA NDLGFSLGPR LNAAGRLDDM 300
  301 SIGVALLLSD DIAQARALAI DLDTLNQTRR EIEQGMQVEA LQLCDQLERT SSELPYGIAM 360
  361 YHPEWHQGVV GILASRIKER FHRPVIAFAP AGEGLLKGSG RSVAGLHMRD ALERLDTLNP 420
  421 GLILKFGGHA MAAGLSLEEG KFDEFRQRFA DLVGEWMDAS QLEGVIWSDG ELNGAELSLE 480
  481 TAELLRDGGP WGQSFPEPTF DGKFRILQQR LVGERHLKLM VEPLNGGPLL DGIAFNVDTT 540
  541 LWPDSSVREV KLAYKLDINE YRGNRSVQLL VQHLWPY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
deoxyribonuclease activity	3.0051764426766	bayes_pls_golite062009
exodeoxyribonuclease activity	2.95229098929295	bayes_pls_golite062009
exodeoxyribonuclease activity, producing 5'-phosphomonoesters	2.9500987818733	bayes_pls_golite062009
single-stranded DNA specific exodeoxyribonuclease activity	2.72110588435439	bayes_pls_golite062009
exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	2.59454342567539	bayes_pls_golite062009
exonuclease activity	2.57506733103287	bayes_pls_golite062009
catalytic activity	2.15198373249096	bayes_pls_golite062009
hydrolase activity	1.87485052902921	bayes_pls_golite062009
nuclease activity	1.375718110904	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	1.17433205668743	bayes_pls_golite062009

No functions predicted.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.95

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..491]	PSI-BLAST	94.522879	Exonuclease RecJ
2	View Details	[492..577]	MSA	1.216979	View MSA. No confident structure predictions are available.

Protein Overview: gi|162354213, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: