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Protein Overview: gi|254848304, gi...

General Information:
Name(s) found: gi|75829485 [NCBI NR]
gi|254848304 [NCBI NR]
gi|254844009 [NCBI NR]
gi|125617444 [NCBI NR]
gi|116188358 [NCBI NR]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • gi|75829485|ref|ZP_00758786.1| COG0009: Putative translation factor (SUA5) [Vibrio cholerae MO10] [NCBI NR]
  • gi|254848304|ref|ZP_05237654.1| conserved hypothetical protein [Vibrio cholerae MO10] [NCBI NR]
  • gi|254844009|gb|EET22423.1| conserved hypothetical protein [Vibrio cholerae MO10] [NCBI NR]
  • gi|125617444|gb|EAZ46009.1| conserved hypothetical protein [Vibrio cholerae MO10] [NCBI NR]
  • gi|116188358|ref|ZP_01478135.1| hypothetical protein VchoM_02002714 [Vibrio cholerae MO10] [NCBI NR]
    • Organism: Vibrio cholerae MO10
    Length: 206 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQFFYVHPE NPQTRLINQA VAIIRNGGVV VYPTDSGYAL GCQLENKHGM ERICQIRRLD  60
   61 DKHNFTLLCR DLSELSLYAR VDNTAFRLLK NNTPGPYTFI FKGTKEVPRR LMNEKRKTIG 120
  121 IRVPNNKIAL DLLEALGEPL MSTSLILPGN DFTESDPEEI RDRLEHAVDV ILNGGYLGQQ 180
  181 PTTVIDFSDD EVVVARVGAG DPTPFQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] PSI-BLAST 70.69897 Hypothetical protein YciO

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.410994327621936 bayes_pls_golite062009
  • catalytic activity
    		•  0.343636936190038 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.280229875175501 bayes_pls_golite062009
  • RNA binding
    		•  0.119986061060909 bayes_pls_golite062009
  • protein binding
    		•  0.0580085924119811 bayes_pls_golite062009
  • DNA binding
    		•  0.0294511791688091 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle