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Protein Overview: gi|57237929, gi|...

General Information:
Name(s) found: gi|57237929 [NCBI NR]
gi|57166733 [NCBI NR]
Description(s) found:
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  • gi|57237929|ref|YP_179177.1| thiamine-phosphate pyrophosphorylase, putative [Campylobacter jejuni RM1221] [NCBI NR]
  • gi|57166733|gb|AAW35512.1| thiamine-phosphate pyrophosphorylase, putative [Campylobacter jejuni RM1221] [NCBI NR]
  • thiamine-phosphate pyrophosphorylase, putative [Campylobacter jejuni RM1221] [nr-271106-contam.fasta]
    • Organism: Campylobacter jejuni RM1221
    Length: 201 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: thiamin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: thiamin-phosphate diphosphorylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWDKKIIAIS DRKCVEIDFL KQIEKLAKAK VDAIVLREKD LSEFEYYDLA KEVLSICAKQ  60
   61 KVTCFLHFFD RECLKLGHRY FHAPLSLLRK EPKLTKYFHI LGTSVHSKEE LLEAMSYKVN 120
  121 YAFVGHIFES SCKMGLEPKG IDFLKSLLEF SQIPLYAIGG INAQNIENFK DINVVGVCMR 180
  181 EILMKEKDLK KYLLECRQNL R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] PSI-BLAST 39.09691 Thiamine phosphate pyrophosphorylase from Pyrococcus furiosus Pfu-1255191-001

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • thiamin-phosphate diphosphorylase activity
    		•  6.04450222340788 bayes_pls_golite062009
  • catalytic activity
    		•  2.31352397210218 bayes_pls_golite062009
  • phosphomethylpyrimidine kinase activity
    		•  2.16632642989285 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.16976945211093 bayes_pls_golite062009
  • transferase activity
    		•  1.16478613213801 bayes_pls_golite062009
  • phosphotransferase activity, phosphate group as acceptor
    		•  0.63318404518052 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle