YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: LOLB_ECOHS

General Information:
Name(s) found: LOLB_ECOHS [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • Outer-membrane lipoprotein LolB OS=Escherichia coli O9:H4 (strain HS) GN=lolB PE=3 SV=1 [Swiss-Prot]
    • Organism: Escherichia coli HS
    Length: 207 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLPDFRLIR LLPLAALVLT ACSVTTPKGP GKSPDSPQWR QHQQDVRNLN QYQTRGAFAY  60
   61 ISDQQKVYAR FFWQQTGQDR YRLLLTNPLG STELELNAQP GNVQLVDNKG QRYTADDAEE 120
  121 MIGKLTGMPI PLNSLRQWIL GLPGDATDYK LDDQYRLSEI TYSQNGKNWK VVYGGYDTKT 180
  181 QPAMPANMEL TDGGQRIKLK MDNWIVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..207] PSI-BLAST 56.0 Outer membrane lipoprotein receptor LolB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein transporter activity
    		•  5.26309175650793 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  5.24235483861853 bayes_pls_golite062009
  • transporter activity
    		•  3.49447699177014 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.40253685210141 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.1520022161519 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.10255727756177 bayes_pls_golite062009
  • protein binding
    		•  2.1080237568481 bayes_pls_golite062009
  • binding
    		•  1.76935925638807 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle