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Protein Overview: PDE1_SCHPO

General Information:
Name(s) found: PDE1_SCHPO [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • 3',5'-cyclic-nucleotide phosphodiesterase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cgs2 PE=3 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 346 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHAALEIKEA EFQTDQVVGL VENSFTLYSL GQNGGPLESC CSSHLISDGA FQEIISLDGG  60
   61 SHLSALVELI QSKHLSVDSW SSITKYDNYT VENESYAKAW HLSEQRIKTF LITHCHLDHI 120
  121 YGAVINSAMF GPQNPRTIVG LNYVIDTLKK HVFNNLLWPS LDKAGFINFQ VVEPSMYTSL 180
  181 TTTLSILPFP VNHGSSFGQE LKSSAFLFRN NLSDRYFLAF GDVEPDMVAS EPLNIHIWRA 240
  241 CSSLIAQRKL SHILIECSTP DIPDTLLFGH FCPRHLVNEL CILQSLVQSY GVIMPTLTCL 300
  301 LTHLKSHPLQ SANPADVILE QLESLSSKSS LSVTFKILQR GQFYKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..346] PSI-BLAST 32.09691 Crystal structure of RNase Z

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleic acid binding
    		•  2.08234598427969 bayes_pls_golite062009
  • binding
    		•  1.45486959337001 bayes_pls_golite062009
  • protein binding
    		•  1.22353256456298 bayes_pls_golite062009
  • catalytic activity
    		•  0.941400907161877 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  0.115001587361034 bayes_pls_golite062009
  • hydrolase activity
    		•  0.021392930321391 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle