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Protein Overview: gi|75512184, gi|...

General Information:
Name(s) found: gi|75512184 [NCBI NR]
gi|188496088 [NCBI NR]
gi|188491287 [NCBI NR]
Description(s) found:
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  • gi|75512184|ref|ZP_00734756.1| COG0233: Ribosome recycling factor [Escherichia coli 53638] [NCBI NR]
  • gi|188496088|ref|ZP_03003358.1| ribosome releasing factor [Escherichia coli 53638] [NCBI NR]
  • gi|188491287|gb|EDU66390.1| ribosome releasing factor [Escherichia coli 53638] [NCBI NR]
  • COG0233: Ribosome recycling factor [Escherichia coli 53638] [nr-271106-contam.fasta]
    • Organism: Escherichia coli 53638
    Length: 185 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISDIRKDAE VRMDKCVEAF KTQISKIRTG RASPSLLDGI VVEYYGTPTP LRQLASVTVE  60
   61 DSRTLKINVF DRSMSPAVEK AIMASDLGLN PNSAGSDIRV PLPPLTEERR KDLTKIVRGE 120
  121 AEQARVAVRN VRRDANDKVK ALLKDKEISE DDDRRSQDDV QKLTDAAIKK IEAALADKEA 180
  181 ELMQF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] PSI-BLAST 72.09691 Ribosome recycling factor, RRF

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation regulator activity
    		•  4.3587179630028 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  4.16037247039451 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.79085926340206 bayes_pls_golite062009
  • binding
    		•  2.89152455528061 bayes_pls_golite062009
  • translation termination factor activity
    		•  2.10810503428749 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle