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Protein Overview: gi|76643613

General Information:
Name(s) found: gi|76643613 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|76643613|ref|XP_888305.1| PREDICTED: similar to Pre-mRNA processing splicing factor 8 (Splicing factor Prp8) (PRP8 homolog) (220 kDa U5 snRNP-specific protein) (p220) isoform 13 [Bos taurus] [NCBI NR]
    • Organism: Bos taurus
    Length: 2336 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVFPYRGP GNPVPGPLAP LPDYMSEEKL QEKARKWQQL QAKRYAEKRK FGFVDAQKED  60
   61 MPPEHVRKII RDHGDMTNRK FRHDKRVYLG ALKYMPHAVL KLLENMPMPW EQIRDVPVLY 120
  121 HITGAISFVN EIPWVIEPVY ISQWGSMWIM MRREKRDRRH FKRMRFPPFD DEEPPLDYAD 180
  181 NILDVEPLEA IQLELDPEED APVLDWFYDH QPLRDSRKYV NGSTYQRWQF TLPMMSTLYR 240
  241 LANQLLTDLV DDNYFYLFDL KAFFTSKALN MAIPGGPKFE PLVRDINLQD EDWNEFNDIN 300
  301 KIIIRQPIRT EYKIAFPYLY NNLPHHVHLT WYHTPNVVFI KTEDPDLPAF YFDPLINPIS 360
  361 HRHSGSHLQE PLPDDDEEFE LPEFVEPFLK DTPLYTDNTA NGIALLWAPR PFNLRSGRTR 420
  421 RALDIPLVKN WYREHCPAGQ PVKVRVSYQK LLKYYVLNAL KHRPPKAQKK RYLFRSFKAT 480
  481 KFFQSTKLDW VEVGLQVCRQ GYNMLNLLIH RKNLNYLHLD YNFNLKPVKT LTTKERKKSR 540
  541 FGNAFHLCRE VLRLTKLVVD SHVQYRLGNV DAFQLADGLQ YIFAHVGQLT GMYRYKYKLM 600
  601 RQIRMCKDLK HLIYYRFNTG PVGKGPGCGF WAAGWRVWLF FMRGITPLLE RWLGNLLARQ 660
  661 FEGRHSKGVA KTVTKQRVES HFDLELRAAV MHDILDMMPE GIKQNKARTI LQHLSEAWRC 720
  721 WKANIPWKVP GLPTPIENMI LRYVKAKADW WTNTAHYNRE RIRRGATVDK TVCKKNLGRL 780
  781 TRLYLKAEQE RQHNYLKDGP YITAEEAVAV YTTTVHWLES RRFSPIPFPP LSYKHDTKLL 840
  841 ILALERLKEA YSVKSRLNQS QREELGLIEQ AYDNPHEALS RIKRHLLTQR AFKEVGIEFM 900
  901 DLYSHLVPVY DVEPLEKITD AYLDQYLWYE ADKRRLFPPW IKPADTEPPP LLVYKWCQGI 960
  961 NNLQDVWETS EGECNVMLES RFEKMYEKID LTLLNRLLRL IVDHNIADYM TAKNNVVINY1020
 1021 KDMNHTNSYG IIRGLQFASF IVQYYGLVMD LLVLGLHRAS EMAGPPQMPN DFLSFQDIAT1080
 1081 EAAHPIRLFC RYIDRIHIFF RFTADEARDL IQRYLTEHPD PNNENIVGYN NKKCWPRDAR1140
 1141 MRLMKHDVNL GRAVFWDIKN RLPRSVTTVQ WENSFVSVYS KDNPNLLFNM CGFECRILPK1200
 1201 CRTSYEEFTH KDGVWNLQNE VTKERTAQCF LRVDDESMQR FHNRVRQILM ASGSTTFTKI1260
 1261 VNKWNTALIG LMTYFREAVV NTQELLDLLV KCENKIQTRI KIGLNSKMPS RFPPVVFYTP1320
 1321 KELGGLGMLS MGHVLIPQSD LRWSKQTDVG ITHFRSGMSH EEDQLIPNLY RYIQPWESEF1380
 1381 IDSQRVWAEY ALKRQEAIAQ NRRLTLEDLE DSWDRGIPRI NTLFQKDRHT LAYDKGWRVR1440
 1441 TDFKQYQVLK QNPFWWTHQR HDGKLWNLNN YRTDMIQALG GVEGILEHTL FKGTYFPTWE1500
 1501 GLFWEKASGF EESMKWKKLT NAQRSGLNQI PNRRFTLWWS PTINRANVYV GFQVQLDLTG1560
 1561 IFMHGKIPTL KISLIQIFRA HLWQKIHESI VMDLCQVFDQ ELDALEIETV QKETIHPRKS1620
 1621 YKMNSSCADI LLFASYKWNV SRPSLLADSK DVMDSTTTQK YWIDIQLRWG DYDSHDIERY1680
 1681 ARAKFLDYTT DNMSIYPSPT GVLIAIDLAY NLHSAYGNWF PGSKPLIQQA MAKIMKANPA1740
 1741 LYVLRERIRK GLQLYSSEPT EPYLSSQNYG ELFSNQIIWF VDDTNVYRVT IHKTFEGNLT1800
 1801 TKPINGAIFI FNPRTGQLFL KIIHTSVWAG QKRLGQLAKW KTAEEVAALI RSLPVEEQPK1860
 1861 QIIVTRKGML DPLEVHLLDF PNIVIKGSEL QLPFQACLKV EKFGDLILKA TEPQMVLFNL1920
 1921 YDDWLKTISS YTAFSRLILI LRALHVNNDR AKVILKPDKT TITEPHHIWP TLTDEEWIKV1980
 1981 EVQLKDLILA DYGKKNNVNV ASLTQSEIRD IILGMEISAP SQQRQQIAEI EKQTKEQSQL2040
 2041 TATQTRTVNK HGDEIITSTT SNYETQTFSS KTEWRVRAIS AANLHLRTNH IYVSSDDIKE2100
 2101 TGYTYILPKN VLKKFICISD LRAQIAGYLY GVSPPDNPQV KEIRCIVMVP QWGTHQTVHL2160
 2161 PGQLPQHEYL KEMEPLGWIH TQPNESPQLS PQDVTTHAKI MADNPSWDGE KTIIITCSFT2220
 2221 PGSCTLTAYK LTPSGYEWGR QNTDKGNNPK GYLPSHYERV QMLLSDRFLG FFMVPAQSSW2280
 2281 NYNFMGVRHD PNMKYELQLA NPKEFYHEVH RPSHFLNFAL LQEGEVYSAD REDLYA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle