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Protein Overview: pes-22

General Information:
Name(s) found: pes-22 / CE39589 [WormBase]
Description(s) found:
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  • WBGene00003986 locus:mct-4 status:Partially_confirmed UniProt:H2L0E6 protein_id:CCD72668.1 [WormBase]
  • gi|85662563|gb|ABC71825.1| Patterned expression site protein 22, isoform b [Caenorhabditis elegans] [NCBI NR]
  • gi|115533488|ref|NP_001041267.1| Patterned Expression Site family member (pes-22) [Caenorhabditis elegans] [NCBI NR]
  • CE39589 WBGene00003986 locus:pes-22 status:Partially_confirmed UniProt:Q2L6X8_CAEEL protein_id:ABC71825.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE39589 WBGene00003986 locus:pes-22 status:Partially_confirmed UniProt:Q2L6X8_CAEEL protein_id:ABC71825.1| [wormORF-contam.fasta]
  • CE39589 WBGene00003986 locus:pes-22 status:Partially_confirmed TR:Q2L6X8 protein_id:ABC71825.1 [wormpep160-contam.fasta]
  • Patterned Expression Site family member (pes-22) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Patterned expression site protein 22, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE39589 WBGene00003986 locus:pes-22 status:Partially_confirmed UniProt:Q2L6X8 protein_id:ABC71825.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE39589 WBGene00003986 locus:pes-22 status:Partially_confirmed UniProt:H2L0E6 protein_id:CCD72668.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE39589 WBGene00003986 locus:mct-4 status:Partially_confirmed UniProt:H2L0E6 protein_id:CCD72668.1 [wormpep246-ecoli-contam.fasta]
  • MonoCarboxylate Transporter family OS=Caenorhabditis elegans GN=mct-4 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 777 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: transport [IEALink to PubMed article]
    organic anion transport [IEALink to PubMed article]
    Molecular Function: secondary active monocarboxylate transmembrane transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDGPDPNRS SQPTSPTKSL KSERNGESNF EEDDQDIGSL NDGQLTNYSS QYSINMGVQQ  60
   61 VEPLLVPQAP DGGYGWVIVF AAFMSNLVVD GISTAFSEFK QSYKERYQES DGLTVFIGSL 120
  121 IIGTYLLVGP LVSALCNKYE QRYVVMAGGL ISGIAFMIAP ASPNIYVFML IYGVMGGLGF 180
  181 GMIYLPAIVV VGFYFDSKRA MATGISVAGS GVGTFLVPLI CQVCIANLGW QKTIWVLAVM 240
  241 IFSCVFYGYL YRPLPMVDLN EIRDQEMEPL RQALSKVEDD EDEAVESPHP NRSTSAASGA 300
  301 IEDEAVSQNP EVQRLRSILT EGDEGSETPK SDAHKVRSHT ATRSRKHTMT SNSGSQHDLK 360
  361 LSRGNLSSDN RLSRVSARDF NQSLSKLSKS GGASNLSIAM SGVDPKEFQR PMNRQDIFYG 420
  421 GSIQNLKEFK EEGTMAGYRA STLSIPRSVV GQAVSQLNLS RTGSRLGGPG IAEDEEEMIE 480
  481 PFVDDGCCKV LPLPMRNALS EMIDLNLLKN KTMMILCISN LLGMMGFYIP IMFLKDLSES 540
  541 MKLDMSLAMF LVPIFGVFNT IGRVFFGWLT DQKILSALTI NNLSLIVSGL LTLACPLLTS 600
  601 IAGQYFYAIV FGFIISAYIC LTSIVLADLM GLENLTNSFG LLVVARGIAS LVGPPFAGIV 660
  661 YDITGSYDTA FYFGGLVLLV AGLISATIPF VTKKDADTAD GMPQLQDQDN VSGKLSVLTE 720
  721 RSEEALTDYQ RTIQSMKQQH QLLQDLEEEK RKQKQNGVVE EGNEMDDNIP LKSLKNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..492] PSI-BLAST 26.30103 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    2 View Details [493..777] FFAS03 3.54 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.118997796261274 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.130189855627041 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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