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Protein Overview: gi|222612815, gi...

General Information:
Name(s) found: gi|78708621 [NCBI NR]
gi|222612815 [NCBI NR]
gi|215704201 [NCBI NR]
gi|115481978 [NCBI NR]
gi|113639191 [NCBI NR]
Description(s) found:
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  • gi|78708621|gb|ABB47596.1| calmodulin-binding family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|222612815|gb|EEE50947.1| hypothetical protein OsJ_31494 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215704201|dbj|BAG93041.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115481978|ref|NP_001064582.1| Os10g0411500 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113639191|dbj|BAF26496.1| Os10g0411500 [Oryza sativa Japonica Group] [NCBI NR]
  • Os10g0411500 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • calmodulin-binding family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 649 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSISYPPD DYLPAMEDNM GRLFIRSLSF DDDMEAAADD SPSTSPMPSP SATLLPAFGS  60
   61 GGKLIIEGSL SFKRREADPV QMETMISIRS PKSDKESCSS KPNATAGASR FALAGDQTPE 120
  121 DSPVIAGVAS PKHQAAAVRL QKVYKSFRTR RQLADCAVLV EQSWWKLLDF ALLKRNSVSF 180
  181 FDIEKPETAI SRWSRARMRA AKVGKGLSKD EKAQKLALQH WLEAIDPRHR YGHNLHYYYH 240
  241 RWLHCEINQP FFYWLDVGEG KDVNLEEHCP RWKLHKQCIK YLGPKERESY EVIVEDSRLI 300
  301 YKLSRQIVNT TKSRKGSKWI FVLSTCKTLY IGQKQKGTFQ HSSFLAGGAT SAAGRLIVED 360
  361 GILKAVWPHS GHYRPTEQNF QEFMNFLKER NVDLTDVMLN PSEGEDDAEF SLKSSHSRQD 420
  421 LTELCEPDMQ EHEEQVTQHH GADETKTSSD APTMTSTETM ASTPAIRKST SANKLQGKRP 480
  481 PRLLISSNNT ELPATHCNGR PSPVHKDIDE DSTMFGECLA FCKKNLFAEE GNEEDELVEV 540
  541 PEEMIMNRIN CKKATKSYQL GKQLSFQWST GAGPRIGCVR DYPSELQFRA LEEVSLSPRG 600
  601 TRSTRFSSPR RKPLTPNSIP VARFGCSPTA QGDNMGLKPR QRCATWTAF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..262] PSI-BLAST 11.0 No description for 2dfsA was found.
    2 View Details [263..375] MSA 1.098969 View MSA. No confident structure predictions are available.
    3 View Details [376..563] MSA 7.047997 View MSA. No confident structure predictions are available.
    4 View Details [564..649] MSA 2.030993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle