Protein Overview: gi|77556423

General Information:
Name(s) found:	gi\|77556423 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|77556423\|gb\|ABA99219.1\| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa (japonica cultivar-group)] [NCBI NR] retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
Organism:	Oryza sativa Japonica Group
Length:	2360 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNTRSNGNG PNNPNNNNNG ENPTLAQVLA QQTQLMNMMM QQFQNQQNQG NNHAPPQNKL  60
   61 AEFLRVRPPV FSSTTNPVEA SDWLHAIEKK LDLLQCTDQE KVSFASHQLH GPASEWWDHF 120
  121 RLNRTTAEPI TWLEFTAAFR KTHIPSGVVS LKKKEFRSLS QGSRSVTEYL HEFNRLARYA 180
  181 PEDVRNDEER QEKFLGGLND ELSYPLMVGD YPDFQKLVDK AIRQEDKYNR MEQKKRRIAQ 240
  241 FKTQQGNNQK PRLTLGPQPM PQGGSSSVVR PQRQFFNNNA GNNIRNQAPR PVAAPAQQQP 300
  301 AKREQGNKPV VCFNCGDPGH YADKCPKPRR VKVVSAQSNS AVPASKARVN HVAAAEAQDA 360
  361 PDVILGTFLV NSVPATVLFD SGATHSFLSM SFAGNHGMEV EDLRRPLMVS TPSNQALSLQ 420
  421 RSPSVRIEIQ GVPFLANLIL LESKDLDVIL GMDWLARHKG VIDCANRKVT LNSYDGRVVT 480
  481 VHALSSESLR SRLNQITLEE IPIVREYPDV FPDDLPGMPP KRDIEFRIDL VPGTTPIHKR 540
  541 PYRMAANELA EVKRQVDDLL QKGYIRPSSS PWGAPVIFVE KKDHTQRMCV DYRALNDVTI 600
  601 KNKYPLPRID DLFDQLKGAT VFSKIDLRSG YHQLRIKEED IPKTAFTTRY GLFECTVMSF 660
  661 GLTNAPAFFM NLMNKVFMEY LDKFVVVFID DILIYSRTKE EHEELLRLAL EKLREHQLFI 720
  721 ENFSKIAKPM TRLLQKDVKY KWSEECEQSF QELKSRLISA PILILPDPKK GFQVYCDASK 780
  781 LGLGCVLMQD GKVVAYASRQ LRPHEKNYPT HDIELAAVVH ALKIWRHYLF GTHTEVYTDH 840
  841 KSLKYIFTQP DLNMRQRRWL ELIKDYDMGI HYHPGKANVV ADALSRKGHC NATEGRQLPL 900
  901 ELCKEFERLN LGIVGRGFVA ALEAKPTLID QVREAQINDP DIQEIKKNMR RGKAIGFLED 960
  961 EQGTVWLGER ICVPDNKDLK DAILKEAHDT LYSIHPGSTK MYQDLKERFW WASMKREIAE1020
 1021 YVAVCDVCQR VKAEHQKPAG LLQPLKIPEW KWEEIGMDFI TGLPRTSSGH DSIWVIVDRL1080
 1081 TKVAHFIPVK TTYSGSRLAE LYMARIVCLH GVPKKIVSDR GSQFTSNFWK KLQEEMGSKL1140
 1141 NFSTAYHPQT DGQTERVNQI LEDMLRACAL DFSGSWDKNL PYAEFSYNNS YQASLQMAPY1200
 1201 EALYGRKCRT PLLWDQTGER QVFGTDILRE AEEKVKIIQE RLRVAQSRHK SYADNRRRDL1260
 1261 SFEEGDYVYL RVTPFRGVHR FHTKEKLAPR FVGPYKIVSR RGEVAYQLEL PQSLAGIHNV1320
 1321 FHVSQLKKCL RVPTEEANIE QIEVQEDLTY VEKPIRILET TPGLEWYIPS LEIELCSRGG1380
 1381 CSEWLGLYNR GSHTCKRLEF WIEIPGVTGK ISLLDSVSDQ SGENRISAPF GLPNAAESYF1440
 1441 KTISIELASN HSGEIASSPT SPDQDDGAYP PILMKLPDDL AAVSITTASP SRRPRRKSAS1500
 1501 TPTSPSFREV GVILQPLGTV STDQLDGYYS SPTVDSRPTD IVEYDEFSSR YNDPDLDDFD1560
 1561 GSLDDNYTPL YFGVFMADNE TEEQCQARET EARRETERRR LEEEHQAQEQ ERLRREQQER1620
 1621 ERTAKEAEDR RQRALEAGRR ARDLIGQQDV EGTPVFRTPQ QNAVAAITLL DTLLKENELN1680
 1681 QSDHVVNILN QTKTMIAASV PVNSESVHTP TGSRVPHSRS HDYRHLSLSI TGAGSNRRSR1740
 1741 GHDERSVHSP PDHHRERRVE RPRSPPRRRP VDLRDTIIQR RAARGHHHAP DRHDDDLDGV1800
 1801 AAFTDDLRRV DWPAGFKPTG IEKYDGTTNP ESWLTVYGLA IRAAGGDSKA MANYLPVALA1860
 1861 DSARSWLHGL PRGTIGSWAE LRDHFIANFQ GTFERPGTQY DLYNVIQKSG ESLRDYIRRF1920
 1921 SEQRNKISDI TDDVIIAAFT KGIRHEELVG KFGRKPPKTV KLMFEKANEY AKAEDAVTAS1980
 1981 KQSGPSWKPN KGTPAKGGGG SNNHKDRKRK PEELVATATH SSRQRSRVNT FDKIMNSQCP2040
 2041 HHPNSNHVAK DCFVYKQFAE QYTKTTRKNS DEEQSTSRKK DDGDTPAGFQ DHRKELNHIF2100
 2101 SGPLAYESKR KQKLTEREIN AVQPDTPQYL RWSEIAIKFD RSDHPDRVVH PGRYPLVLDP2160
 2161 VVRNVKLRRT LIDGGSALNI LFAKTLDDMQ IPRSELKPSN APFHGVIPGL SATPLGQITL2220
 2221 PVTFGTRENF RTENISFEVA DFETTYHAIL GRPALAKFMA VPHYTYMMTK MPGPRGVLSL2280
 2281 RSDIKQAVTC DKESCDMAQT REMASAREDI RLAAATASEG EVPATKISKS GESEAKTKKI2340
 2341 PLDPSDSTKT AVIGAELDCK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.96

Protein Overview: gi|77556423

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: