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Protein Overview: C3H66_ORYSJ

General Information:
Name(s) found: C3H66_ORYSJ [Swiss-Prot]
Description(s) found:
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  • gi|77554746|gb|ABA97542.1| Zinc finger CCCH type domain containing protein ZFN, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|222616953|gb|EEE53085.1| hypothetical protein OsJ_35844 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215767059|dbj|BAG99287.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|122204753|sp|Q2QT65.1|C3H66_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 66; Short=OsC3H66 [NCBI NR]
  • gi|115488274|ref|NP_001066624.1| Os12g0405100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113649131|dbj|BAF29643.1| Os12g0405100 [Oryza sativa Japonica Group] [NCBI NR]
  • Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1 [Swiss-Prot]
  • Os12g0405100 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Zinc finger CCCH type domain containing protein ZFN, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 454 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGAGAGGG GGEGDSNGGG TSPGGVSAAA PAIGPHHLGV AAAEEAMWQM TLGGGESMES  60
   61 TPYPERIGEP DCSYYMRTGL CRFGMTCKFN HPPNRKLAVA AARMNGEYPY RVGQPECQYY 120
  121 LKTGTCKFGA TCKFHHPREK AALANRVQLN VLGYPMRPNE KECAYYLRTG QCKFASTCKF 180
  181 HHPQPSNTMV AVRNSMYSPG QSATSPGQHT YPGAVTNWTL SRSASFIASP RWPGHSGYAQ 240
  241 VIVPQGLVQV PGWNPYAAQM GSSSPDDQQR TPVTTQYYGS RQSETGGMGD HGMYQSYQGG 300
  301 SVPVGVYTVQ GENIFPERPD QPECQFYMKT GDCKFGAVCK FHHPKERLVP APNCALNSLG 360
  361 LPLRPGEPVC TFYSRYGICK FGPNCKFDHP MGTLMYGSAT SPRGDVSSMH YQLSPSPGHP 420
  421 GILLDGGSGR SHRVPQSDSQ QIPSGDGNAE REAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] PSI-BLAST 8.09691 Solution Structure of the Zinc-finger domain in KIAA1064 protein
    2 View Details [187..315] deduced N/A No confident structure predictions are available.
    3 View Details [316..454] FFAS03 3.04 Solution Structure of the Zinc-finger domain in KIAA1064 protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle