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Protein Overview: gi|108862503, gi...

General Information:
Name(s) found: gi|77554365 [NCBI NR]
gi|108862503 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|77554365|gb|ABA97161.1| expressed protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|108862503|gb|ABG21971.1| expressed protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 475 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLSPNESKT SELVKSLREK KIGIVAHFYM DPEVQGILTA SKKHWPHIHI SDSLVMADSA  60
   61 VKMAEAGCEY ITVLGVDFMS ENVRAILDQA GYSKVGVYRM SSDQIGCSLA DAASSSAYTH 120
  121 FLKEASRSPP SLHVIYINTS LETKAHAHEL VPTITCTSSN VVATILQAFA QIPGLNVWYG 180
  181 PDSYMGANIA DLFQRMAVMS DEEIAEVHPS HNKKSINALL PRLHYYQDGN CIVHDMFGHE 240
  241 VVDKIKEQYC DAFLTAHFEV PGEMFSLSME AKTRGMGVVG STQNILDFIK NHLMEALDRN 300
  301 IDDHLQFVLG TESGMITSIV AAVRELFDSY KTSQQSANIE VEIVFPVSSD AVSNTSVNGS 360
  361 HHLDSSTVTD LDNVSVVPGV SSGEGCSIHG GCASCPYMKM NSLRSLLKVC HQLPDRDNRL 420
  421 VAYQASRFNA KTPLGKLVAE VGCEPILHMR HFQATKRLPD KLVHHVIHGK GEPTS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..377] PSI-BLAST 96.0 Crystal structure of quinolinate synthase (nadA)
    2 View Details [378..475] MSA 1.014993 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • quinolinate synthetase A activity
    		•  13.6613396373416 bayes_pls_golite062009
  • catalytic activity
    		•  1.94308403509017 bayes_pls_golite062009
  • binding
    		•  0.5033130924527 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle