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Protein Overview: gi|108862133, gi...

General Information:
Name(s) found: gi|77553574 [NCBI NR]
gi|108862133 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|77553574|gb|ABA96370.1| arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|108862133|gb|ABA96372.2| Alpha-L-arabinofuranosidase C-terminus family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 502 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSREPFLSA IFFFFFLLLF CLGCKCIASE LHLHTTQTAV LKVDASLQHA RQIPDTLFGI  60
   61 FFEEINHAGA GGIWAELVSN RGFEAGGPHT PSNIDPWSII GDDSSIFVAT DRTSCFSRNT 120
  121 VALRMEVLCD NCPAGGVGIY NPGFWGMNIE DGKTYNLVMY VKSPETVELT VSLTSSDGSQ 180
  181 NLASSTIPVS GASNWTKLEQ KLVAKGTNRT SRLQITTTKK GVVWFDQVSL MSADTYKGHG 240
  241 FRTELISMML DLKPRFLRFP GGCFVEGEWL RNAFRWRESI GPWEERPGHF GDVWHYWTDD 300
  301 GLGYYEFLQL SEDLGAAPIW VFNNGISHND EVDTAAIAPF VKDVLDSLEF ARGSADSTWG 360
  361 SVRAAMGHPE PFPVKYVAIG NEDCGKKFYR GNYLKFYNAI REAYPDIQMI SNCDASSRPL 420
  421 DHPADLYDFH VYTDSKTLFS MKSAFDRSSR NGPKAFVSEY AVWRSDAGRG SLLASLAEAA 480
  481 FLTGLEKNRL SFLETIFSFR VV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..204] PSI-BLAST 18.69897 Carbohydrate binding module from laminarinase 16A
    2 View Details [205..502] PSI-BLAST 89.30103 Crystal structure of a family 51 (GH51) alpha-L-arabinofuranosidase from Geobacillus stearothermophilus T6

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle