Protein Overview: POL_HV1JR

General Information:
Name(s) found:	POL_HV1JR [Swiss-Prot]
Description(s) found: Found 4 descriptions. SHOW ALL	Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF) GN=gag-pol PE=1 SV=3 [Swiss-Prot]
Organism:	Human immunodeficiency virus type 1 (JRCSF ISOLATE)
Length:	1439 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGARASVLSG GELDRWEKIR LRPGGKKKYR LKHIVWASRE LERFAVNPGL LESSEGCRQI  60
   61 LGQLQPSLKT GSEELTSLYN TVATLYCVHQ RIEIKDTKEA LEKIEEEQTK SMKKAQQAAA 120
  121 DTGNSSQVSQ NYPIVQNLQG QMVHQAISPR TLNAWVKVIE EKAFSPEVIP MFSALSEGAT 180
  181 PQDLNTMLNT VGGHQAAMQM LKETINEEAA EWDRLHPVHA GPIAPGQMRE PRGSDIAGTT 240
  241 STLQEQIGWM TNNPPIPVGE IYKRWIILGL NKIVRMYSPV SILDIRQGPK EPFRDYVDRF 300
  301 YKTLRAEQAT QEVKNWMTET LLVQNANPDC KTILKALGPA ATLEEMMTAC QGVGGPGHKA 360
  361 RVLAEAMSQV TNPATIMMQR GNFRNQRKNV KCFNCGKEGH IARNCRAPRK KGCWKCGKEG 420
  421 HQMKECTERQ ANFLREDLAF LQGKAREFPS EQTRANSPTR RELQVWGRDS NSLSEAGAEA 480
  481 GADRQGIVSF NFPQITLWQR PLVTIKIGGQ LKEALLDTGA DDTVLEDMDL PGRWKPKMIG 540
  541 GIGGFIKVRQ YDQIPIDICG HKAVGTVLVG PTPVNIIGRN LLTQIGCTLN FPISPIETVP 600
  601 VKLKPGMDGP KVKQWPLTEE KIKALVEICT EMEKEGKISK IGPENPYNTP VFAIKKKDST 660
  661 KWRKLVDFRE LNRRTQDFWE VQLGIPHPAG LKKKKSVTVL DVGDAYFSVP LDKDFRKYTA 720
  721 FTIPSINNET PGIRYQYNVL PQGWKGSPAI FQSSMTKILE PFRKQNPDII IYQYMDDLYV 780
  781 GSDLEIGQHR TKIEELRQHL LKWGFTTPDK KHQKEPPFLW MGYELHPDKW TVQPIVLPEK 840
  841 DSWTVNDIQK LVGKLNWASQ IYAGIKVKQL CKLLRGTKAL TEVIPLTKEA ELELAENREI 900
  901 LKEPVHGVYY DPSKDLIVEI QKQGQGQWTY QIFQEPFKNL KTGKYARTRG AHTNDVKQLT 960
  961 EAVQKIANES IVIWGKIPKF KLPIQKETWE TWWTEYWQAT WIPEWEFVNT PPLVKLWYQL1020
 1021 EKEPIVGAET FYVDGAANRE TKLGKAGYVT SRGRQKVVSL TDTTNQKTEL QAIHLALQDS1080
 1081 GLEVNIVTDS QYALGIIQAQ PDKSESELVS QIIEQLIKKE KVYLAWVPAH KGIGGNEQVD1140
 1141 KLVSAGIRKV LFLDGIDKAQ EDHEKYHSNW RAMASDFNLP PIVAKEIVAS CDKCQLKGEA1200
 1201 MHGQVDCSPG IWQLDCTHLE GKIILVAVHV ASGYIEAEVI PAETGQETAY FLLKLAGRWP1260
 1261 VTTIHTDNGS NFTSTTVKAA CWWAGIKQEF GIPYNPQSQG VVESMNKELK KIIGQVRDQA1320
 1321 EHLKTAVQMA VFIHNFKRKG GIGGYSAGER IIDIIATDIQ TKELQKQITK IQNFRVYYRD1380
 1381 NRDPIWKGPA KLLWKGEGAV VIQDNSDIKV VPRRKVKIIR DYGKQMAGDD CVASRQDED

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: POL_HV1JR

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: