Protein Overview: CE39380

General Information:
Name(s) found:	CE39380 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00019123 status:Predicted UniProt:O01898 protein_id:CCD64974.1 [WormBase] gi\|82654503\|gb\|AAB54258.2\| Hypothetical protein F59E12.8 [Caenorhabditis elegans] [NCBI NR] gi\|115533918\|ref\|NP_495098.2\| hypothetical protein F59E12.8 [Caenorhabditis elegans] [NCBI NR] CE39380 WBGene00019123 status:Predicted UniProt:O01898_CAEEL protein_id:AAB54258.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE39380 WBGene00019123 status:Predicted UniProt:O01898_CAEEL protein_id:AAB54258.2\| [wormORF-contam.fasta] CE39380 WBGene00019123 status:Predicted TR:O01898 protein_id:AAB54258.2 [wormpep160-contam.fasta] F59E12.8 [Caenorhabditis elegans] [nr-271106-contam.fasta] Hypothetical protein F59E12.8 [Caenorhabditis elegans] [nr-271106-contam.fasta] CE39380 WBGene00019123 status:Predicted UniProt:O01898 protein_id:AAB54258.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE39380 WBGene00019123 status:Predicted UniProt:O01898 protein_id:CCD64974.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
Organism:	Caenorhabditis elegans
Length:	412 amino acids
Gene Ontology:
Cellular Component:	membrane [IEA] integral to membrane [IEA]
Biological Process:	NONE FOUND
Molecular Function:	ionotropic glutamate receptor activity [IEA] extracellular-glutamate-gated ion channel activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGDIQKGRI DMACGRFRMT ADRANVLTFT YPTQFEVNQV YLITDPQKSV DVVFLFHPFS  60
   61 TTVWLLLSLT VLVVAIVFFI LRFVEFKSTK ETESSYECIQ NSIFQVLLST FNLEIRVAKK 120
  121 STFFAFHLFS TIWLLAWFHV FIDFYTSELS GMMVVSDKRQ VPFDNFYGFI DHLRKGNYRL 180
  181 FTPSADRIPE CPHEITTSKC NAIFSEILSK HPPEYGDLMQ LNDREFVSSR KIPLVGFGWY 240
  241 PAQRISSKFS IWTEELFHSD IWLIRDFPVC PAAYIVRPTF PYLDELNEMI IKRIDNHYTP 300
  301 AYPELTLTGK PSKSSFSLNQ LSSIFLIHLL GAFVSTLFLI AELVIGKTDF LTHIVVFYRT 360
  361 LNLDYGKIFF FPINVSSSYG SYFSAELTKR HNIDSTLQTR LDNSKSLKME NG

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..92]	PSI-BLAST	8.39794	Glutamine-binding protein
2	View Details	[93..155]	deduced	N/A	No confident structure predictions are available.
3	View Details	[156..347]	PSI-BLAST	18.69897	Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid
4	View Details	[348..412]	deduced	N/A	No confident structure predictions are available.

Protein Overview: CE39380

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: