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Protein Overview: gi|56967269

General Information:
Name(s) found: gi|56967269 [NCBI NR]
Description(s) found:
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  • gi|56967269|pdb|1XW8|A Chain A, X-Ray Structure Of Putative Lactam Utilization Protein Ybgl. Northeast Structural Genomics Consortium Target Et90 [NCBI NR]
  • Chain A, X-Ray Structure Of Putative Lactam Utilization Protein Ybgl. Northeast Structural Genomics Consortium Target Et90 [nr-271106-contam.fasta]
    • Organism: Escherichia coli
    Length: 252 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 XKIDLNADLG EGCASDAELL TLVSSANIAC GFHAGDAQIX QACVREAIKN GVAIGAHPSF  60
   61 PDRENFGRSA XQLPPETVYA QTLYQIGALA TIARAQGGVX RHVKPHGXLY NQAAKEAQLA 120
  121 DAIARAVYAC DPALILVGLA GSELIRAGKQ YGLTTREEVF ADRGYQADGS LVPRSQSGAL 180
  181 IENEEQALAQ TLEXVQHGRV KSITGEWATV AAQTVCLHGD GEHALAFARR LRSAFAEKGI 240
  241 VVAALEHHHH HH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|134105085, gi... gi|189095939, gi... gi|56967269 gi|60594470, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..252] PSI-BLAST 98.39794 X-ray structure of putative lactam utilization protein YBGL. Northeast Structural Genomics Consortium target ET90.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.412391974836 bayes_pls_golite062009
  • hydrolase activity
    		•  0.333866445066122 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle