Protein Overview: rn-PD

General Information:
Name(s) found:	rn-PD / FBpp0288913 [FlyBase]
Description(s) found: SHOW ONLY BEST	gi\|221378185\|ref\|NP_001138020.1\| rotund, isoform D [Drosophila melanogaster] [NCBI NR] gi\|220903021\|gb\|ACL83479.1\| rotund, isoform D [Drosophila melanogaster] [NCBI NR] The gene rotund is referred to in FlyBase by the symbol Dmel\rn (CG42277, FBgn0259172). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:3099460..3135119. It has the cytological map location 84D3. Based on sequence similarity, it is predicted to have molecular function</span>: transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: negative regulation of transcription; compound eye development; imaginal disc-derived leg morphogenesis. 70 alleles are reported. The phenotypes of these alleles are annotated with 32 unique terms, many of which group under: adult segment; organ system; adult mesothoracic segment; external compound sense organ; peripheral nervous system; thoracic segment; metatarsus; appendage segment; nervous system; female germline cyst; antennal segment. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase] (AE003672) CG14601 gene product [Drosophila melanogaster] [yeastflysequest.fasta] type=protein; loc=3R:complement(3126299..3126898,3127481..3127894); ID=FBpp0288913; name=rn-PD; parent=FBgn0259172,FBtr0299638; dbxref=FlyBase_Annotation_IDs:CG42277-PD,FlyBase:FBpp0288913,REFSEQ:NP_001138020,GB_protein:ACL83479; MD5=43124543911e8ed85bfed [fly-100309-contam.fasta] type=protein; loc=3R:complement(3126299..3126898,3127481..3127894); ID=FBpp0288913; name=rn-PD; parent=FBgn0259172,FBtr0299638; dbxref=FlyBase_Annotation_IDs:CG42277-PD,FlyBase:FBpp0288913,REFSEQ:NP_001138020,GB_protein:ACL83479; MD5=43124543911e8ed85bfedd486354c285; length=337; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=3R:complement(3126299..3126898,3127481..3127894); ID=FBpp0288913; name=rn-PD; parent=FBgn0259172,FBtr0299638; dbxref=FlyBase_Annotation_IDs:CG42277-PD,FlyBase:FBpp0288913,REFSEQ:NP_001138020,GB_protein:ACL83479; MD5=43124543911e8ed85bfedd486354c285; length=337; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta] Rotund, isoform D OS=Drosophila melanogaster GN=rn PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
Organism:	Drosophila melanogaster
Length:	337 amino acids
Gene Ontology:
Cellular Component:	nucleus [ISS]
Biological Process:	imaginal disc-derived leg morphogenesis [IMP] negative regulation of transcription [IMP] regulation of transcription [ISS] compound eye development [IMP]
Molecular Function:	transcription factor activity [ISS] zinc ion binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHELIGKYSH SDMDMLKDQL KRGGYMGALG PPTPGTSAPS PFLMPAEFYK SLLASAVLQQ  60
   61 QQQHKFYAGT PSPSPAPSLS PTSGRHLLFS TAAAATACAP ENGHVKTELE EQDQQNGMPE 120
  121 TVGHEEQKPI IEENPTPNKP HNNNGYSWST GNNNEVVSHS SNGHTNNHPT TPPTPPNEAS 180
  181 ATQATSVSAI NLNQAQPASQ TRSNFGSSIK SPPSEPDAVT AATCKSQENN SGQNPTPNSL 240
  241 SDHNPAHNLN SNSTAAAVAA AAAAAAAANM PIGGVQGQNP TQGLVHWMSA VMAEHMTGQT 300
  301 HHDPGAVGMH YMWNGNVDVS INWITGFTGA GKIRGAC

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.76

Protein Overview: rn-PD

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: