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Protein Overview: mod-1

General Information:
Name(s) found: mod-1 / CE38391 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00003386 locus:mod-1 status:Partially_confirmed UniProt:H2L0B8 protein_id:CCD72366.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [ISSLink to PubMed article]
    postsynaptic membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    neuronal cell body [IDALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    behavioral response to starvation [IMPLink to PubMed article]
    serotonin receptor signaling pathway [IDALink to PubMed article][IMPLink to PubMed article]
    chloride transport [IDALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: neurotransmitter receptor activity [IEALink to PubMed article]
    extracellular ligand-gated ion channel activity [IDALink to PubMed article][IEALink to PubMed article]
    chloride channel activity [IDALink to PubMed article]
    serotonin receptor activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFIPEITLL LLLFVHSTQA KGKRRKCPEG AWSEGKIMNT IMSNYTKMLP DAEDSVQVNI  60
   61 EIHVQDMGSL NEISSDFEID ILFTQLWHDS ALSFAHLPAC KRNITMETRL LPKIWSPNTC 120
  121 MINSKRTTVH ASPSENVMVI LYENGTVWIN HRLSVKSPCN LDLRQFPFDT QTCILIFESY 180
  181 SHNSEEVELH WMEEAVTLMK PIQLPDFDMV HYSTKKETLL YPNGYWDQLQ VTFTFKRRYG 240
  241 FYIIQAYVPT YLTIIVSWVS FCMEPKALPA RTTVGISSLL ALTFQFGNIL KNLPRVSYVK 300
  301 AMDVWMLGCI SFVFGTMVEL AFVCYISRCQ NSVRNAERRR ERMRNSQVWA NGSCRTRSNG 360
  361 YANGGSVISH YHPTSNGNGN NNRHDTPQVT GRGSLHRNGP PSPLNLQMTT FDSEIPLTFD 420
  421 QLPVSMESDR PLIEEVTVKV VN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] PSI-BLAST 74.0 Refined structure of the nicotinic acetylcholine receptor at 4A resolution.
    2 View Details [342..442] PSI-BLAST 28.69897 Acetylcholine receptor protein, beta chain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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