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Protein Overview: tbc-11

General Information:
Name(s) found: tbc-11 / CE37909 [WormBase]
Description(s) found:
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  • WBGene00018075 locus:tbc-11 status:Partially_confirmed UniProt:Q5LK42 protein_id:CCD70616.1 [WormBase]
  • gi|71989353|ref|NP_001024629.1| TBC (Tre-2/Bub2/Cdc16) domain family member (tbc-11) [Caenorhabditis elegans] [NCBI NR]
  • gi|56797834|gb|AAW30667.1| Hypothetical protein F35H12.2c [Caenorhabditis elegans] [NCBI NR]
  • CE37909 WBGene00018075 status:Partially_confirmed TR:Q5LK42 protein_id:AAW30667.1 [wormpep150.fasta]
  • 37909 WBGene00018075 status:Partially_confirmed TR:Q5LK42 protein_id:AAW30667.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE37909 WBGene00018075 locus:tbc-11 status:Partially_confirmed UniProt:Q5LK42_CAEEL protein_id:AAW30667.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE37909 WBGene00018075 status:Partially_confirmed UniProt:Q5LK42_CAEEL protein_id:AAW30667.1| [wormORF-contam.fasta]
  • Hypothetical protein F35H12.2c [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F35H12.2c [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE37909 WBGene00018075 locus:tbc-11 status:Partially_confirmed UniProt:Q5LK42 protein_id:AAW30667.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE37909 WBGene00018075 locus:tbc-11 status:Partially_confirmed UniProt:Q5LK42 protein_id:CCD70616.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of H2KZZ6, TBC (Tre-2/Bub2/Cdc16) domain family OS=Caenorhabditis elegans GN=tbc-11 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 571 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: regulation of Rab GTPase activity [IEALink to PubMed article]
    Molecular Function: Rab GTPase activator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTQLLHPTG DDESDCDEPL LSGSGKVSQE CKEEHLEMWD QLIENWDQQS DRPQKISELV  60
   61 LDGIPDKLRG RVWQLLSNAI DQPDLVEKYH IFLSQPCPSE QVIMRDIHRT FPAHDYFKES 120
  121 QGKGQQSLYK ISKVYSLYDE EVSYCQGLSF LAASLLLHMP EEQAFCTLVK IMFNYGLRDL 180
  181 FKLGFDNLHL RFFQLTALLK DYIPDLSHHL EHIGIETHMY ASQWFLTLFT AKFPLQMVFF 240
  241 ILDLFLSQGM NTIFHISLAL LDDAKTDLLQ LDFEGTLKYF RVSLPRKYRT EASTKCLIHK 300
  301 AVKFRLNHSK LEVYENEYKR IKELERENED PVLRMEKEIG RHQANTLRLE RENDDLAHEL 360
  361 VTSKIELRRK LDVAEDQIET SANAIERLTR QNMDILEENK NLMREYEQIK EMYRRDVLRL 420
  421 EENGSRAEKL LAEYKKLFSE RSKRAENERE HFEVQKKAII ARISDCDKCW PAVCEWEKNR 480
  481 SPVHSASTPT GPDLLTKLEE REDHIKNLEI DLAQTKLSLV EAECRNQDLT HQLMAQSESD 540
  541 GKKWFKKTIT QLKEVGSSLK HHERSNSSVT P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] PSI-BLAST 46.09691 No description for 2qq8A was found.
    2 View Details [118..571] PSI-BLAST 35.522879 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle