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Protein Overview: CE38699

General Information:
Name(s) found: CE38699 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00008555 status:Partially_confirmed UniProt:G5ECS7 protein_id:CAA93488.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 571 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSAKIGDGS TSSLPMSSAK PMSTQTSEPQ LPDVPEPNES LHNKTIDEFQ KDQEKCDRLK  60
   61 ARKAELEMRL RQKMQELKDV CVEEGDITGE MPVEINDVVL PGDDFPRLKR RVGTAYSIPD 120
  121 ELIKADKADK MSQLETDVEL HRRIVAAASR LATDKNTNKS VRKKRQKDLQ AARLRLNRLE 180
  181 QGLQQMRHSA SKPDISSLTS DSSNSWTASN SSGPMLTMAM TKSCPTTPRG SVPDLRNGLD 240
  241 DEKDEFDENV EDRVSRRAPS AISRHSLSQR YSGVSSSSTS SGSDSMGLGL PPRPTSRKSQ 300
  301 QQQTTPFDDQ LDNPMICEIP PPPSSAAAHP LYENVGYRST SYRSSYRQAH YPTIQDEHTQ 360
  361 RKRAQSAHSI STDNGATGRT STYSVPLNDA AQKFREYDYD DEEDSTPTMD LPSHLINVRR 420
  421 LTSSISCQAG FATASLDRRY SKLNGGRLSS GGGGSDDVVR QNVTTRITTF PVATSAATVI 480
  481 LSGKPYSASE LPRFQPPPPV ARVTHMPRGS LPPYSSATMG AQSPAPPPNG KLPTNPQMEA 540
  541 LLSYYKQQQQ QQHQQQSRSA PSQQPKTATI V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] PSI-BLAST 13.69897 Tropomyosin
    2 View Details [82..452] PSI-BLAST 21.0 Heavy meromyosin subfragment
    3 View Details [453..571] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle