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Protein Overview: CE40408

General Information:
Name(s) found: CE40408 [WormBase]
Description(s) found:
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  • WBGene00008555 status:Partially_confirmed UniProt:Q8I093 protein_id:CAA93487.2 [WormBase]
  • gi|133931081|ref|NP_502441.2| hypothetical protein F07C6.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|114420888|emb|CAA93487.2| C. elegans protein F07C6.4a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE40408 WBGene00008555 status:Partially_confirmed UniProt:Q8I093_CAEEL protein_id:CAA93487.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • [wormORF-contam.fasta]
  • CE40408 WBGene00008555 status:Partially_confirmed UniProt:Q8I093_CAEEL protein_id:CAA93487.2| [wormORF-contam.fasta]
  • Hypothetical protein F07C6.4a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE40408 WBGene00008555 status:Partially_confirmed TR:Q8I093 protein_id:CAA93487.2 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE40408 WBGene00008555 status:Partially_confirmed UniProt:Q8I093 protein_id:CAA93487.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • Isoform of G5ECW4, Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F07C6.4 PE=4 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDPNRIVSA SRRPKALIRL LDSQQIEVVL HSRLSVEDVL RLVAEKVDLS FPDSQYFCLG  60
   61 FSDNLNNFHW LDGSVILYDL VASTSNPKGT LTLSHHVRFF VDTIYEVQCA STAKLFFFDI 120
  121 HNQLARHELL VTSEDYFELV AILVSVFVPD CQEHTTAEAI SRIMPMSHPP YILLKTDQSE 180
  181 VERRVFEKFR YYRRLPVGTG MISFIKLAEK SESYGYRMYE ALNENNDKCI LSIGYKGIYI 240
  241 YRRSRHQNLI TPYLAYPWRV IDNLYYRDKK FSIEIREPKK NESSENVSDD VILINDRQLS 300
  301 EAFSHPTTQV SCGRRRSNNQ QPRVLLFPFT CQTPLVCRTV WMSAIAQHRF FLERKELKKV 360
  361 SGDLLFFLPF LFRQSVLLLV FQSPFRPGGA HFAQKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..396] PSI-BLAST 65.154902 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle