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Protein Overview: CE39100

General Information:
Name(s) found: CE39100 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00018513 status:Confirmed UniProt:Q9BI62 protein_id:CCD71333.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tRNA processing [IEALink to PubMed article]
    Molecular Function: RNA binding [IEALink to PubMed article]
    tRNA methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLSNKFQL LQWNFRRLLN IPQKTVSPVV WRPPMITSSH EPSSEFRENL SEEENKRIDR  60
   61 ILEELFLFSR LSVRFPKKIS DSEWKTFLEL KSRKSRFDEA MFLFRKEKLE EEDARKKLEK 120
  121 VNFRKISEQN VGSRVPSYML HFPNSVSEEY YQMKRLYEAY LLENRPILAV DCQFLSRLSP 180
  181 RGRGLTALQL QYLITENRRN PDPFRLHFVN YDSKNSSIQD LEKSKLQSIR KSHVFNPIVT 240
  241 ENGLETYENH SKNVIYLSPD ATEELESVDD DKIYVIGGIV DRVPEPGIPK HASLEASQSA 300
  301 GVFARKLPID RYVDFKSGSK FLTLLAVAEI LRQVNIHGDW KKAMKVAIPV RNTRGADEKN 360
  361 PKARAAQLRI HAFNQEILKR IDRRLGKDFI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] MSA 30.114997 View MSA. No confident structure predictions are available.
    2 View Details [161..390] Pfam 60.113509 No description for PF01746.12 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle