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Protein Overview: lpd-5

General Information:
Name(s) found: lpd-5 / CE40009 [WormBase]
Description(s) found:
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  • WBGene00003061 locus:lpd-5 status:Confirmed UniProt:Q9N4L8 protein_id:CCD73571.1 [WormBase]
  • gi|89179498|gb|AAF40003.2| Lipid depleted protein 5 [Caenorhabditis elegans] [NCBI NR]
  • gi|115533653|ref|NP_491359.2| LiPid Depleted family member (lpd-5) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE40009 WBGene00003061 locus:lpd-5 status:Confirmed UniProt:Q9N4L8_CAEEL protein_id:AAF40003.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE40009 WBGene00003061 locus:lpd-5 status:Confirmed UniProt:Q9N4L8_CAEEL protein_id:AAF40003.2| [wormORF-contam.fasta]
  • CE40009 WBGene00003061 locus:lpd-5 status:Confirmed TR:Q9N4L8 protein_id:AAF40003.2 [wormpep160-contam.fasta]
  • LiPid Depleted family member (lpd-5) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Lipid depleted protein 5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE40009 WBGene00003061 locus:lpd-5 status:Confirmed UniProt:Q9N4L8 protein_id:AAF40003.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE40009 WBGene00003061 locus:lpd-5 status:Confirmed UniProt:Q9N4L8 protein_id:CCD73571.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • LiPid Depleted OS=Caenorhabditis elegans GN=lpd-5 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 176 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial inner membrane [IEALink to PubMed article]
    Biological Process: lipid storage [IMPLink to PubMed article]
    electron transport [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: oxidoreductase activity, acting on NADH or NADPH [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRAGASRCL SAGNTAFRCL STGKDNLPVT RSHDAKKVEL NDILDKPSQK TPVKVSSDET  60
   61 MDIGGVPLDH QDARTARIFR PARETTQSAW GNTKSWTIEL DNRQRWENPL MGWSGTADPL 120
  121 SNVGMDLKFA TKEDAIAFCE KNRWEFDVEE PHERKIKPKN YGQNFSWNRR TRIGTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] Pfam 68.309804 No description for PF04800.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.69

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle