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Protein Overview: RPA1080

General Information:
Name(s) found: RPA1080 [rpal_3_plus_contams.fasta]
Description(s) found:
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  • gi|39934155|ref|NP_946431.1| 2-pyrone-4,6-dicarboxylate hydrolase [Rhodopseudomonas palustris CGA009] [NCBI NR]
  • gi|39648003|emb|CAE26523.1| possible 2-pyrone-4,6-dicarboxylate hydrolase [Rhodopseudomonas palustris CGA009] [NCBI NR]
  • possible 2-pyrone-4,6-dicarboxylate hydrolase [Rhodopseudomonas palustris CGA009]gi|39934155|ref|NP_946431.1| possible 2-pyrone-4,6-dicarboxylate hydrolase [Rhodopseudomonas palustris CGA009] [nrdb_11152004_Chlamydomonas]
  • RPA1080 possible 2-pyrone-4,6-dicarboxylate hydrolase 1188686:1189588 forward MW:32571 [rpal_3_plus_contams.fasta]
  • possible 2-pyrone-4,6-dicarboxylate hydrolase [Rhodopseudomonas palustris CGA009] [nr-271106-contam.fasta]
    • Organism: Rhodopseudomonas palustris CGA009
    Length: 300 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKADPSKGP APACPGPDPA PRRPTRYVVP PGAVDTHAHV IGLPPTYPFV DARSYTPPAA  60
   61 TPESYLAMLD ATGMTYGVVV QVSVHGTDNR LMLETLQAHR DRLKGIAVIP LGLPDKELAA 120
  121 LKDAGVVGLR LNILYGGGIG FERVGEYAAM AKELGWHLQF LIDAKDLVPL APQLGGLPVP 180
  181 FIVDHWGHFP VSRGIDDPGF QTLVSLVRDG AWVKLSGAYR NTVAGFPYLD TIPFARLLHE 240
  241 TAPDRCVWGS DWPHVATWQH MMNVGELLDL LADWVPDAAA RDRVFTDNAY RLYGFTPVQG 300
  301

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] PSI-BLAST 45.522879 No description for 2qahA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle