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Protein Overview: gi|63481680, gi|...

General Information:
Name(s) found: gi|94363708 [NCBI NR]
gi|63481680 [NCBI NR]
gi|51705492 [NCBI NR]
Description(s) found:
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  • gi|94363708|ref|XP_991730.1| PREDICTED: similar to ribosomal protein L18a isoform 5 [Mus musculus] [NCBI NR]
  • gi|63481680|ref|XP_622577.1| PREDICTED: similar to ribosomal protein L18a isoform 3 [Mus musculus] [NCBI NR]
  • ref|XP_489723.1| similar to 60S ribosomal protein L18a [Mus musculus] [NCBI NR]
  • Similar to 60S riboSomal protein L18a [ipi.MOUSE.v3.06.fasta]
  • similar to 60S ribosomal protein L18a [Mus musculus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 PREDICTED: similar to ribosomal protein L18a isoform 2 [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • PREDICTED: similar to ribosomal protein L18a isoform 3 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 Similar to 60S riboSomal protein L18a [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • PREDICTED: similar to ribosomal protein L18a isoform 5 [Mus musculus] [NCBI-RefSeq_mouse_na_03-19-2007_reversed.fasta]
  • Tax_Id=10090 SIMILAR TO 60S RIBOSOMAL PROTEIN L18A [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=LOC669021 similar to ribosomal protein L18a isoform 5 [zeeyong.fasta]
  • PREDICTED: similar to ribosomal protein L18a isoform 2 [Mus musculus] [mouse-040506-contam.fasta]
    • Organism: Mus musculus
    Length: 176 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASGTLREY KVVGRCLPTP KCHTPPLYRM RIFAPNHVVA KSRFWYFVSQ LKKMKKSSGE  60
   61 IVYCGQVFEK SPLRVKNFGI WLRYDSRSGT HNMYREYRDL TTAGAVTQCY LDMGARHRAR 120
  121 AHSIQIMKVE EIAAGKCRRT AVKQFHDSKI KFPLPHRVLR RQHKPRFTTK RPNTFC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] Pfam 138.013228 No description for PF01775.8 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle