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Protein Overview: SCAR1_ARATH

General Information:
Name(s) found: SCAR1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79324228|ref|NP_001031474.1| WAVE1; actin monomer binding [Arabidopsis thaliana] [NCBI NR]
  • gi|75120351|sp|Q6AWX6.1|SCAR1_ARATH RecName: Full=Protein SCAR1; Short=AtSCAR1; AltName: Full=Protein WAVE1 [NCBI NR]
  • gi|51100955|tpg|DAA05586.1| TPA_exp: SCAR1 [Arabidopsis thaliana] [NCBI NR]
  • Protein SCAR1 OS=Arabidopsis thaliana GN=SCAR1 PE=1 SV=1 [Swiss-Prot]
  • TPA: SCAR1 [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Protein SCAR1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATRANGAP2, ATSCAR1, WAVE1 | WAVE1 (WASP (WISKOTT-ALDRICH SYNDROME PROTEIN)-FAMILY VERPROLIN HOMOLOGOUS PROTEIN 1) | chr2:14426511-14430338 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Protein SCAR1 (AtSCAR1) (Protein WAVE1) [nr-271106-contam.fasta]
  • WAVE1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • TPA_exp: SCAR1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: WAVE1 | SCAR family protein | chr2:14419432-14423259 REVERSE LENGTH=821 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 821 amino acids

    Gene Ontology:
    Cellular Component: SCAR complex [TAS]
    Biological Process: positive regulation of actin nucleation [IMP]
    Molecular Function: actin monomer binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLVRLQVRN VYGLGQKELH TKVDREDPKA ILDDVAVSGL VGILRQLGDL TEFAAEIFHG  60
   61 IQEEVMITAS RSNKLKMRLK QIEAKVPTIQ KTVLAQTNHI HFAYTGGLEW HPRIPNVQNH 120
  121 FMYDELPPFI MTPYEDCREP PRLHLLDKFD INGPGSCLKR YSDPTHFKRA SRASKPSEIK 180
  181 KKKSIQRGRD ISRLASVANQ SDRKTCTSLS FSGRTSTSKT ASTIEIESKS DLQEHRSFSF 240
  241 DSRSGGEKPK RVSSSSRFTP GSRTIASVLS ESESESDSPS QDLTARGSSS VSWHEKAEIV 300
  301 ECNVLQCATD EAPEVMETNF VLDAEPVSRL KEHSAVEAVQ DIKPKELEMD NEDETESEGD 360
  361 DFVDALYTID SESENDEAFQ ATKEVQKNLY NDITEQETEK ISNNFSVDET KCAATSELHL 420
  421 SSSPVYKSDE LIHQDPWAAS EISSGTHSYS NGFSNPLYDI SGIQEHQESE EVESSCDTES 480
  481 IKTWTNGNLL GLKPSKPKII AETIPEIVED IDSETFQEHL REDYKAPFDW FTSSPPLDHM 540
  541 KISFKSSETL PSSELQLKLP DEYTFSSFQL VPETIATSLP DSDSDKDTFC RSSSYISDNS 600
  601 DNDNRSVSMS EQQWEEESEG IRESKRQQEL YDSFHRVNAE ASSLPVPFPK IETTNGCLVE 660
  661 NVSYLQNPAE PLPPPLPPLQ WMVSKIPSAG FEDNNKQSLK DALTQAFEKN NNSLTAVKKK 720
  721 EPHIVTVSDP KLVTKVHLKN NVRDYKQSHG NTNETEAGDF LHQIRTKQFN LRRVVRTKTS 780
  781 SSETTMNTNI SVILEKANSI RQAVASDDGE GESDTWSDSD T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] MSA 2.338996 View MSA. No confident structure predictions are available.
    2 View Details [154..197] deduced N/A No confident structure predictions are available.
    3 View Details [198..373] deduced N/A No confident structure predictions are available.
    4 View Details [374..477] deduced N/A No confident structure predictions are available.
    5 View Details [478..545] deduced N/A No confident structure predictions are available.
    6 View Details [546..606] deduced N/A No confident structure predictions are available.
    7 View Details [607..821] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle