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Protein Overview: AGL27_ARATH

General Information:
Name(s) found: AGL27_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|51970682|dbj|BAD44033.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|51968636|dbj|BAD43010.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|30699235|ref|NP_177833.3| MAF1 (MADS AFFECTING FLOWERING 1); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|28416627|gb|AAO42844.1| At1g77080 [Arabidopsis thaliana] [NCBI NR]
  • gi|26450236|dbj|BAC42235.1| MADS affecting flowering 1 MAF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|21617978|gb|AAM67028.1| MADS affecting flowering 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|16580105|gb|AAK54440.1| MADS box FLC1-like nuclear protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13649969|gb|AAK37527.1|AF342808_1 MADS affecting flowering 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|110735881|dbj|BAE99916.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • Agamous-like MADS-box protein AGL27 OS=Arabidopsis thaliana GN=AGL27 PE=1 SV=1 [Swiss-Prot]
  • MADS affecting flowering 1 [Arabidopsis thaliana]gi|26450236|dbj|BAC42235.1| MADS affecting flowering 1 MAF1 [Arabidopsis thaliana]gi|28416627|gb|AAO42844.1| At1g77080 [Arabidopsis thaliana]gi|51970682|dbj|BAD44033.1| unnamed protein product [Arabidops [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MADS-box protein AGL27-II (AGL27) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: FLM, AGL27, MAF1 | MAF1 (MADS AFFECTING FLOWERING 1); transcription factor | chr1:28960573-28964739 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • MADS affecting flowering 1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g77080 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MADS box FLC1-like nuclear protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MADS affecting flowering 1 MAF1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MAF1 (MADS AFFECTING FLOWERING 1); transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MAF1, FLM, AGL27 | K-box region and MADS-box transcription factor family protein | chr1:28955679-28959845 FORWARD LENGTH=196 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: photoperiodism, flowering [IMP]
    regulation of flower development [IMP]
    regulation of transcription, DNA-dependent [ISS]
    negative regulation of flower development [IGI]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRRKIEIKR IENKSSRQVT FSKRRNGLID KARQLSILCE SSVAVVVVSA SGKLYDSSSG  60
   61 DDISKIIDRY EIQHADELRA LDLEEKIQNY LPHKELLETV QSKLEEPNVD NVSVDSLISL 120
  121 EEQLETALSV SRARKAELMM EYIESLKEKE KLLREENQVL ASQMGKNTLL ATDDERGMFP 180
  181 GSSSGNKIPE TLPLLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] PSI-BLAST 18.154902 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [107..196] MSA 9.360995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.0368771990474 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle