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Protein Overview: EF2_ARATH

General Information:
Name(s) found: EF2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30696056|ref|NP_849818.1| LOS1; copper ion binding / translation elongation factor/ translation factor, nucleic acid binding [Arabidopsis thaliana] [NCBI NR]
  • gi|27363422|gb|AAO11630.1| At1g56070/T6H22_13 [Arabidopsis thaliana] [NCBI NR]
  • gi|23397162|gb|AAN31864.1| putative elongation factor [Arabidopsis thaliana] [NCBI NR]
  • gi|23397045|gb|AAN31808.1| putative elongation factor [Arabidopsis thaliana] [NCBI NR]
  • gi|15450763|gb|AAK96653.1| elongation factor EF-2 [Arabidopsis thaliana] [NCBI NR]
  • gi|13605865|gb|AAK32918.1|AF367331_1 At1g56070/T6H22_13 [Arabidopsis thaliana] [NCBI NR]
  • Elongation factor 2 OS=Arabidopsis thaliana GN=LOS1 PE=1 SV=1 [Swiss-Prot]
  • putative elongation factor [Arabidopsis thaliana]gi|23397045|gb|AAN31808.1| putative elongation factor [Arabidopsis thaliana]gi|27363422|gb|AAO11630.1| At1g56070/T6H22_13 [Arabidopsis thaliana]gi|13605865|gb|AAK32918.1| At1g56070/T6H22_13 [Arabidopsis [nrdb_11152004_Chlamydomonas]
  • | Symbols: AT1G56075.1, LOS1 | LOS1 (Low expression of osmotically responsive genes 1); translation elongation factor/ translation factor, nucleic acid binding | chr1:20971910-20974742 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • elongation factor EF-2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g56070/T6H22_13 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative elongation factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • LOS1; GTP binding / translation elongation factor/ translation factor, nucleic acid binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • LOS1; copper ion binding / translation elongation factor/ translation factor, nucleic acid binding [Arabidopsis thaliana] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • | Symbols: LOS1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:20968245-20971077 REVERSE LENGTH=843 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g56070/T6H22_13 OS=Arabidopsis thaliana GN=T6H22.13 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 843 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    membrane [IDA]
    cytosol [IDA]
    nucleolus [IDA]
    plasma membrane [IDA]
    Biological Process: response to cold [IMP]
    Molecular Function: copper ion binding [IDA]
    translation elongation factor activity [ISS]
    translation factor activity, nucleic acid binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKFTADELR RIMDYKHNIR NMSVIAHVDH GKSTLTDSLV AAAGIIAQEV AGDVRMTDTR  60
   61 ADEAERGITI KSTGISLYYE MTDESLKSFT GARDGNEYLI NLIDSPGHVD FSSEVTAALR 120
  121 ITDGALVVVD CIEGVCVQTE TVLRQALGER IRPVLTVNKM DRCFLELQVD GEEAYQTFSR 180
  181 VIENANVIMA TYEDPLLGDV QVYPEKGTVA FSAGLHGWAF TLTNFAKMYA SKFGVVESKM 240
  241 MERLWGENFF DPATRKWSGK NTGSPTCKRG FVQFCYEPIK QIIATCMNDQ KDKLWPMLAK 300
  301 LGVSMKNDEK ELMGKPLMKR VMQTWLPAST ALLEMMIFHL PSPHTAQRYR VENLYEGPLD 360
  361 DQYANAIRNC DPNGPLMLYV SKMIPASDKG RFFAFGRVFA GKVSTGMKVR IMGPNYIPGE 420
  421 KKDLYTKSVQ RTVIWMGKRQ ETVEDVPCGN TVAMVGLDQF ITKNATLTNE KEVDAHPIRA 480
  481 MKFSVSPVVR VAVQCKVASD LPKLVEGLKR LAKSDPMVVC TMEESGEHIV AGAGELHLEI 540
  541 CLKDLQDDFM GGAEIIKSDP VVSFRETVCD RSTRTVMSKS PNKHNRLYME ARPMEEGLAE 600
  601 AIDDGRIGPR DDPKIRSKIL AEEFGWDKDL AKKIWAFGPE TTGPNMVVDM CKGVQYLNEI 660
  661 KDSVVAGFQW ASKEGPLAEE NMRGICFEVC DVVLHSDAIH RGGGQVIPTA RRVIYASQIT 720
  721 AKPRLLEPVY MVEIQAPEGA LGGIYSVLNQ KRGHVFEEMQ RPGTPLYNIK AYLPVVESFG 780
  781 FSSQLRAATS GQAFPQCVFD HWEMMSSDPL EPGTQASVLV ADIRKRKGLK EAMTPLSEFE 840
  841 DKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..843] PSI-BLAST 1000.0 Elongation factor 2 (eEF-2), domain II; Elongation factor 2 (eEF-2), N-terminal (G) domain; Elongation factor 2 (eEF-2), domain IV; Elongation factor 2 (eEF-2)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle