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Protein Overview: RGAP3_ARATH

General Information:
Name(s) found: RGAP3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30690481|ref|NP_850458.1| rac GTPase activating protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|28951019|gb|AAO63433.1| At2g46710 [Arabidopsis thaliana] [NCBI NR]
  • gi|26449717|dbj|BAC41982.1| putative rac GTPase activating protein [Arabidopsis thaliana] [NCBI NR]
  • Rho GTPase-activating protein 3 OS=Arabidopsis thaliana GN=ROPGAP3 PE=2 SV=1 [Swiss-Prot]
  • putative rac GTPase activating protein [Arabidopsis thaliana]gi|28951019|gb|AAO63433.1| At2g46710 [Arabidopsis thaliana]gi|30690481|ref|NP_850458.1| rac GTPase activating protein, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Rac GTPase activating protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | rac GTPase activating protein, putative | chr2:19199175-19201726 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At2g46710 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative rac GTPase activating protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Rac GTPase activator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Rho GTPase activating protein with PAK-box/P21-Rho-binding domain | chr2:19192105-19194656 FORWARD LENGTH=455 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g46710 OS=Arabidopsis thaliana GN=At2g46710 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 455 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: signal transduction [IEA]
    Molecular Function: Rac GTPase activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNFSRSKST GTIGFPEFKP TRPGPDKYEN IHNDDDEYEE GHSTTSTDYY DASTPLSSHA  60
   61 SRSGNGSGSG QLTVVDLLAA VLRKSLVMSC AMERGEDDVV ASMDIGWPTE VKHVSHVTFD 120
  121 RFNGFLGLPS ELEPEVPPRA PSASVSVFGV SAKSMQCSYD DRGNSVPTIL LRMQKRLYTE 180
  181 GGLKAEGIFR INPDNGKEEH VRRQLNCGVV PRGIDVHCLA GLIKAWFREL PTGVLDVLTP 240
  241 EQVMRCNTEE DCSRLVILLP PVESAILDWA IGLMADVVEH EQFNKMNARN VAMVFAPNMT 300
  301 QMADPLTALI HAVQVMNFLK TLILMNLKER ENADAKARWL KKQTSDPSEE WESQHSEILS 360
  361 PEKPNNNNPK FLRVATLCRL EADNEEEFWN IKKRNDHEGV LDTSSGNGNI GPVQRLCKHP 420
  421 LFQLSKSTKK AFVSNRDEGR KGREAWSSRL SSLPW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..336] PSI-BLAST 60.045757 Crystal Structure of the Human Beta2-Chimaerin
    2 View Details [337..455] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • enzyme activator activity
    		•  0.53004209819211 bayes_pls_golite062009
  • GTPase activator activity
    		•  0.528693496432149 bayes_pls_golite062009
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
  • Ras GTPase activator activity
    		•  0.0454578418356197 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle