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Protein Overview: gi|48310606, gi|...

General Information:
Name(s) found: gi|48310606 [NCBI NR]
gi|4583554 [NCBI NR]
gi|30686095 [NCBI NR]
Description(s) found:
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  • gi|48310606|gb|AAT41851.1| At2g34520 [Arabidopsis thaliana] [NCBI NR]
  • gi|4583554|emb|CAB40383.1| ribosomal protein S14 [Arabidopsis thaliana] [NCBI NR]
  • gi|30686095|ref|NP_850232.1| RPS14 (mitochondrial ribosomal protein S14); structural constituent of ribosome [Arabidopsis thaliana] [NCBI NR]
  • ribosomal protein S14 [Arabidopsis thaliana]gi|48310606|gb|AAT41851.1| At2g34520 [Arabidopsis thaliana]gi|30686095|ref|NP_850232.1| ribosomal protein S14 mitochondrial family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ribosomal protein S14 mitochondrial family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RPS14 | RPS14 (MITOCHONDRIAL RIBOSOMAL PROTEIN S14); structural constituent of ribosome | chr2:14555297-14555791 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • RPS14; structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g34520 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ribosomal protein S14 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RPS14 | mitochondrial ribosomal protein S14 | chr2:14548218-14548712 REVERSE LENGTH=164 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g34520 (Precursor) OS=Arabidopsis thaliana GN=rps14 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of P56804, At2g34520 OS=Arabidopsis thaliana GN=rps14 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 164 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [TAS]
    mitochondrial small ribosomal subunit [TAS]
    Biological Process: translation [TAS]
    Molecular Function: structural constituent of ribosome [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLRRVLLN VTSYCQRSLT QSSYSTSGML SRSVVKHANN LGQIQARHFT TTLMKSGPKH  60
   61 SGTEQGVKRN SADHRRRLLA ARFELRRKLY KAFCKDPDLP SEMRDKNRYK LSKLPRNSAF 120
  121 ARIRNRCVFT GRSRSVTELF RVSRIVFRGL ASKGALMGIT KSSW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..56] PSI-BLAST 22.522879 Crystal Structure of Mitochondrial Respiratory Complex II from porcine heart at 2.4 Angstroms
    2 View Details [57..164] PSI-BLAST 33.0 No description for 1vs5N was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.270879137859077 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle